RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 CLDN11O75508 207 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 RARAP10276 462 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 PABPC1P11940 636 aaKnown RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 HOXC13P31276 330 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 TNFRSF4P43489 277 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 KIR2DL1P43626 348 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 TAS2R40P59535 323 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 SMTNL2Q2TAL5 461 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 FUT11Q495W5 492 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 FBXO43Q4G163 708 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 TFAP2DQ7Z6R9 452 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ADIPOR2Q86V24 386 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 NLRP14Q86W24 1093 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 KATNAL2Q8IYT4 538 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 RCOR2Q8IZ40 523 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF557Q8N988 423 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 MNS1Q8NEH6 495 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 USP33Q8TEY7 942 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 TBC1D31Q96DN5 1066 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 RBM41Q96IZ5 413 aaKnown RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 DHX35Q9H5Z1 703 aaKnown RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ZDHHC4Q9NPG8 344 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 INTS6Q9UL03 887 aaKnown RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ZDBF2Q9HCK1 2354 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 F5P12259 2224 aa11.88□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 PROB1E7EW31 1015 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ZBTB24O43167 697 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CREB3O43889 395 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CCNYL3P0C7X3 344 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CSKP41240 450 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 MAGEA9P43362 315 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 PEX5P50542 639 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF135P52742 658 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 MTAPQ13126 283 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF177Q13360 481 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ATP13A4Q4VNC1 1196 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 C2orf27AQ580R0 203 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 ZFYVE27Q5T4F4 411 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 EGFLAMQ63HQ2 1017 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 RWDD4Q6NW29 188 aaKnown RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CCDC117Q8IWD4 279 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 AHI1Q8N157 1196 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CEP112Q8N8E3 955 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 EXD1Q8NHP7 514 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 RPLP0P6Q8NHW5 317 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 WFIKKN2Q8TEU8 576 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 MAIP1Q8WWC4 291 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 HSPH1Q92598 858 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 POLR3BQ9NW08 1133 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 C2orf42Q9NWW7 574 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 KIAA1522Q9P206 1035 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
PFDN1-201ENST00000261813 TBC1D30Q9Y2I9 924 aa11.87□□□□□ -0.51
PFDN1-201ENST00000261813 CHURC1-FNTBB4DL54 471 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 DDX3YO15523 660 aaKnown RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 RHOQP17081 205 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 MZF1P28698 734 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 EPHB2P29323 1055 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 GJC1P36383 396 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 NUMBP49757 651 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 EIF4HQ15056 248 aaKnown RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 PDK2Q15119 407 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 PLEKHG6Q3KR16 790 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 PITRM1Q5JRX3 1037 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 MBLAC2Q68D91 279 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 SETD3Q86TU7 594 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 VSIG1Q86XK7 387 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 APCDD1Q8J025 514 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF513Q8N8E2 541 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-201ENST00000261813 DTWD2Q8NBA8 298 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 ALG14Q96F25 216 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 ACOX2Q99424 681 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 IER2Q9BTL4 223 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 CIPCQ9C0C6 399 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 GOLPH3Q9H4A6 298 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 PRDM16Q9HAZ2 1276 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■□□□ 13.8
PFDN1-201ENST00000261813 TMEM248Q9NWD8 314 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 ELOVL2Q9NXB9 296 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 EFR3BQ9Y2G0 817 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 OR51B4Q9Y5P0 310 aa11.86□□□□□ -0.51
PFDN1-201ENST00000261813 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms