RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FICDQ9BVA6 458 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 C6orf62Q9GZU0 229 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 WRAP73Q9P2S5 460 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 XPR1Q9UBH6 696 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 DHRS12A0PJE2 317 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 FAM149AA5PLN7 773 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 H3BNX3 289 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 ADSSP30520 456 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CSE1LP55060 971 aaKnown RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF235Q14590 738 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 ZPBP2Q6X784 338 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 DNAJB14Q8TBM8 379 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 COQ10BQ9H8M1 238 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 NDFIP2Q9NV92 336 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 COQ6Q9Y2Z9 468 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 SQORQ9Y6N5 450 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 SLC6A3Q01959 620 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 LAMTOR4Q0VGL1 99 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 ZDHHC13Q8IUH4 622 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 HPS1Q92902 700 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 WDCPQ9H6R7 721 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 AAR2Q9Y312 384 aaKnown RBP16.47■□□□□ 0.23
SREBF1-201ENST00000261646 FADS3Q9Y5Q0 445 aa16.47■□□□□ 0.23
SREBF1-201ENST00000261646 CXorf49A8MYA2 514 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ITM2AO43736 263 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF862O60290 1169 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 GSNP06396 782 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 TFEBP19484 476 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 RUNX1T1Q06455 604 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 CGB2Q6NT52 195 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 FAM183BPQ6ZVS7 135 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 DEFB132Q7Z7B7 95 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 BPIFB6Q8NFQ5 453 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 BSNDQ8WZ55 320 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 SNX19Q92543 992 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 PRDM12Q9H4Q4 367 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 MID1IP1Q9NPA3 183 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 SYBUQ9NX95 663 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ANAPC2Q9UJX6 822 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 COQ4Q9Y3A0 265 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 RHOBTB1O94844 696 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 CDH15P55291 814 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 POU4F1Q01851 419 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 GBE1Q04446 702 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 FAM98BQ52LJ0 330 aaKnown RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 FRMD7Q6ZUT3 714 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 TTC30AQ86WT1 665 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 PGAM4Q8N0Y7 254 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 PLD5Q8N7P1 536 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ACTRT2Q8TDY3 377 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 RBBP8Q99708 897 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 SH3GL1Q99961 368 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 AFF4Q9UHB7 1163 aaKnown RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 CAB39Q9Y376 341 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 MYOCOSA0A1B0GUC4 107 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 TMEM114B3SHH9 223 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 PABPC4LP0CB38 370 aaKnown RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 NR4A1P22736 598 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 IVDP26440 423 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ARL13AQ5H913 290 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-201ENST00000261646 BROXQ5VW32 411 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 LIPMQ5VYY2 423 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 MIER2Q8N344 545 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 OR7A2PQ8NGA2 310 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 FIG4Q92562 907 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ROGDIQ9GZN7 287 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
SREBF1-201ENST00000261646 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 H6PDO95479 791 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 XRCC1P18887 633 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 BCAT1P54687 386 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 LSAMPQ13449 338 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 SLC41A1Q8IVJ1 513 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CEP44Q9C0F1 390 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CASS4Q9NQ75 786 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 ABCB10Q9NRK6 738 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 DSEQ9UL01 958 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 FAM95CA0A1B0GW59 222 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 TRIM43BA6NCK2 446 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 TAF4O00268 1085 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 HS6ST1O60243 411 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 THOP1P52888 689 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 INAQ16352 499 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 DGUOKQ16854 277 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PARP8Q8N3A8 854 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 UBR7Q8N806 425 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PLEKHO2Q8TD55 490 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 TRPC4APQ8TEL6 797 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PTCD3Q96EY7 689 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms