RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SNRNP25Q9BV90 132 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 MRPL1Q9BYD6 325 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC2A11Q9BYW1 496 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PLAC1Q9HBJ0 212 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CHST12Q9NRB3 414 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SMYD2Q9NRG4 433 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 HES2Q9Y543 173 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 IPPQ9Y573 584 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 HMX2A2RU54 273 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNF195O14628 629 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ITM2AO43736 263 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 STK10O94804 968 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SORBS2O94875 1100 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CSH1P0DML2 217 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CSH2P0DML3 217 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PAX3P23760 479 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 AKAP5P24588 427 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CD97P48960 835 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 HARS2P49590 506 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CDK9P50750 372 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNF157P51786 506 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TMED1Q13445 227 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 LPIN1Q14693 890 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TAF5Q15542 800 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CDO1Q16878 200 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TCHHL1Q5QJ38 904 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ZCCHC23Q6ZST2 131 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 FRMD7Q6ZUT3 714 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CAND1Q86VP6 1230 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PLD5Q8N7P1 536 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 DLG3Q92796 817 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 MTG1Q9BT17 334 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 C11orf84Q9BUA3 381 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CYP4F11Q9HBI6 524 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 DCDC2Q9UHG0 476 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 GTF2IRD1Q9UHL9 959 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TRPV2Q9Y5S1 764 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 TNPO2O14787 897 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 AVILO75366 819 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 ZBED1O96006 694 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF23P17027 643 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 CYP2B6P20813 491 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 ACADVLP49748 655 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 GALK1P51570 392 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 MRPS6P82932 125 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 CBX3Q13185 183 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 INSCQ1MX18 579 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 TWF2Q6IBS0 349 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 DUS1LQ6P1R4 473 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 KLHL35Q6PF15 583 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 UNC5AQ6ZN44 842 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 Q6ZNX1 250 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 MAVSQ7Z434 540 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 SCUBE3Q8IX30 993 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 TMEM86AQ8N2M4 240 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 HIPK4Q8NE63 616 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 TMEM40Q8WWA1 233 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 ATP2A3Q93084 1043 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 ABTB1Q969K4 478 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 FERMT1Q9BQL6 677 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 PLGRKTQ9HBL7 147 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 SPC25Q9HBM1 224 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 RAB6BQ9NRW1 208 aa11.02□□□□□ -0.65
CHRNA1-201ENST00000261007 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 HACD1B0YJ81 288 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PLIN3O60664 434 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 DAB1O75553 588 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 LYPLA1O75608 230 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 GRAP2O75791 330 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 THRAP10827 490 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ATP6V1B1P15313 513 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 YY1P25490 414 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PCSK6P29122 969 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ADORA2BP29275 332 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 MATKP42679 507 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 MAGEA3P43357 314 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 NUMBP49757 651 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 LILRA4P59901 499 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PHEXP78562 749 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms