RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 PCDHGA3Q9Y5H0 932 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 DGKBQ9Y6T7 804 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PSME4Q14997 1843 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PRORSD1PA6NEY8 169 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 F5H423 210 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 B4GAT1O43505 415 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 GMNNO75496 209 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CHEK2O96017 543 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 KRT3P12035 628 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 TYK2P29597 1187 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 MIPP30301 263 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 NR4A2P43354 598 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 NME5P56597 212 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CBLBQ13191 982 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CMASQ8NFW8 434 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CANT1Q8WVQ1 401 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CYGBQ8WWM9 190 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 UHRF1Q96T88 793 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZBTB26Q9HCK0 441 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 MTMR10Q9NXD2 777 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ANKMY1Q9P2S6 941 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZNF541Q9H0D2 1346 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 TCRBV3S1A0A5B6 114 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 HDCP19113 662 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 MAGEA3P43357 314 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 GRSF1Q12849 480 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 NFIAQ12857 509 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 E2F2Q14209 437 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 CPSF7Q8N684 471 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 OR13F1Q8NGS4 319 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 ATXN7L3BQ96GX2 97 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZNF347Q96SE7 839 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 GATA5Q9BWX5 397 aaPredicted RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 CNTN6Q9UQ52 1028 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 COPG1Q9Y678 874 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 G3V2L1 256 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 MSI1O43347 362 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 GRID2O43424 1007 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 NOL3O60936 208 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TADA2AO75478 443 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 ITGB5P18084 799 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 MX2P20592 715 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TGM1P22735 817 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 CNTFP26441 200 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 RPS6P62753 249 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 BFSP2Q13515 415 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 RFTN1Q14699 578 aaPredicted RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 EML3Q32P44 896 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 SH3PXD2AQ5TCZ1 1133 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 ITIH5Q86UX2 942 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 PEBP4Q96S96 227 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 POLE4Q9NR33 117 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 SUCOQ9UBS9 1254 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 SEPT3Q9UH03 358 aa13.53□□□□□ -0.24
TUBGCP4-201ENST00000260383 TNFRSF10AO00220 468 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 HDAC3O15379 428 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 TFE3P19532 575 aaPredicted RBP13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 HOXA10P31260 410 aaPredicted RBP13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 CNTN2Q02246 1040 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 CASC4Q6P4E1 433 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 RNF19BQ6ZMZ0 732 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 FRA10AC1Q70Z53 315 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 UTS2BQ765I0 119 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 MMAAQ8IVH4 418 aaKnown RBP13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 HACE1Q8IYU2 909 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 SNX19Q92543 992 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 LRRC39Q96DD0 335 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 FEM1CQ96JP0 617 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 FAR2Q96K12 515 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 PGLYRP2Q96PD5 576 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 TCF12Q99081 682 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 PDZD7Q9H5P4 517 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 FANCEQ9HB96 536 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.24
TUBGCP4-201ENST00000260383 UFL1O94874 794 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 ARSAP15289 507 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 BMPR1AP36894 532 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 HNRNPFP52597 415 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms