RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ARF5P84085 180 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 XRCC4Q13426 336 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 CYP1B1Q16678 543 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 RALGPS2Q86X27 583 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 TERB1Q8NA31 727 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 SPATA4Q8NEY3 305 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 NKD2Q969F2 451 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 QKIQ96PU8 341 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 PNKPQ96T60 521 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 FRMD8P1Q9BZ68 369 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 L2HGDHQ9H9P8 463 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 VPS51Q9UID3 782 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 TRIOO75962 3097 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 GOLGA6L10A0A0M3HER8 536 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 PRAMEF11O60813 436 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 KAT7O95251 611 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 VAV1P15498 845 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 CTSOP43234 321 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 CKAP4Q07065 602 aaKnown RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 BYSLQ13895 437 aaKnown RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 PRKD1Q15139 912 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 OASLQ15646 514 aaKnown RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC44A4Q53GD3 710 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC45A4Q5BKX6 768 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 FAM182AQ5T1J6 154 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 MBLAC2Q68D91 279 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 TTC27Q6P3X3 843 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 DRICH1Q6PGQ1 229 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 LRRC49Q8IUZ0 686 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 C12orf50Q8NA57 414 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 WFIKKN2Q8TEU8 576 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 TFB1MQ8WVM0 346 aaKnown RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 MAGOHBQ96A72 148 aaKnown RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 TSGA13Q96PP4 275 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 P2RY13Q9BPV8 354 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 C2orf49Q9BVC5 232 aaPredicted RBP16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 PDFQ9HBH1 243 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 ACTL7AQ9Y615 435 aa16.14■□□□□ 0.18
CCDC90B-201ENST00000260054 HACD1B0YJ81 288 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 PHF2O75151 1096 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 CD160O95971 181 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 PEX11BO96011 259 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 GLULP15104 373 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 CCNCP24863 283 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 RBL1P28749 1068 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 KCNJ1P48048 391 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 AP1B1Q10567 949 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 DMC1Q14565 340 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 DARS2Q6PI48 645 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 LINGO4Q6UY18 593 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 CCDC13Q8IYE1 715 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 SORCS1Q8WY21 1168 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 TTC17Q96AE7 1141 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 TMEM121Q9BTD3 319 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 BRD8Q9H0E9 1235 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 DDX47Q9H0S4 455 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 SP110Q9HB58 689 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 HOMER3Q9NSC5 361 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 MUTYHQ9UIF7 546 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
CCDC90B-201ENST00000260054 TBC1D3BA6NDS4 549 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 ANTXRLA6NF34 631 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 KCNK1O00180 336 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 GRIA2P42262 883 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF33AQ06730 810 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 IL10RBQ08334 325 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 PON2Q15165 354 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 TJAP1Q5JTD0 557 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 TPRG1Q6ZUI0 275 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 CDKL3Q8IVW4 592 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 EZH1Q92800 747 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 ACDQ96AP0 544 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF419Q96HQ0 510 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 CIPCQ9C0C6 399 aa16.13■□□□□ 0.17
CCDC90B-201ENST00000260054 A0A0A0MRY4 1105 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 BCLAF3A2AJT9 711 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 CCDC188H7C350 402 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 MATN3O15232 486 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 MT-CO1P00395 513 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 APODP05090 189 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 POLR2EP19388 210 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 COILP38432 576 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 NRLP54845 237 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 GDF10P55107 478 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 MLF2Q15773 248 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 TIGD7Q6NT04 549 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 CCDC137Q6PK04 289 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 SUGP1Q8IWZ8 645 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
CCDC90B-201ENST00000260054 HTR3CQ8WXA8 447 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms