RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TBC1D30Q9Y2I9 924 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 ZFYVE26Q68DK2 2539 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 TMEM8BA6NDV4 472 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 SNAP91O60641 907 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 RHOCP08134 193 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF18P17022 549 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 CCR5P51681 352 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 MTA1Q13330 715 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 SLC25A52Q3SY17 297 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 NAA35Q5VZE5 725 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 TFAP2DQ7Z6R9 452 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 PHLDB2Q86SQ0 1253 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF683Q8IZ20 524 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 SH2D3CQ8N5H7 860 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 SLC20A1Q8WUM9 679 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 PSMB7Q99436 277 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 STK33Q9BYT3 514 aa19.52■□□□□ 0.72
TM6SF1-201ENST00000258909 GOLGA4Q13439 2230 aaKnown RBP19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 SRRM3A6NNA2 597 aaPredicted RBP19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 C10orf142B7Z368 130 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 K7ERQ8 282 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 GFPT2O94808 682 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 CD38P28907 300 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 MAT2AP31153 395 aaKnown RBP19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 CNTN1Q12860 1018 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 CCDC157Q569K6 752 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 DSG4Q86SJ6 1040 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 GATAD2AQ86YP4 633 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 EPS8L1Q8TE68 723 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 PGAP3Q96FM1 320 aaPredicted RBP19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 SERAC1Q96JX3 654 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 CFAP57Q96MR6 1250 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 CDC6Q99741 560 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 PPM1HQ9ULR3 514 aa19.51■□□□□ 0.71
TM6SF1-201ENST00000258909 A0A0D9SEW6 157 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 A0A1W2PR77 199 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 SRGAP2O75044 1071 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 F9P00740 461 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 SRCP12931 536 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 NOMO3P69849 1222 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 MARCH9Q86YJ5 346 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 EMC1Q8N766 993 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 ATP11CQ8NB49 1132 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 PIP4K2CQ8TBX8 421 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 GANQ9H2C0 597 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 VPS51Q9UID3 782 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 TMEM59LQ9UK28 342 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 DOCK4Q8N1I0 1966 aa19.5■□□□□ 0.71
TM6SF1-201ENST00000258909 FAM208BQ5VWN6 2430 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 A0A1B0GTQ1 180 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 DRGXA6NNA5 263 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 E9PAM4 449 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 MCF2LO15068 1137 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 SMAD6O43541 496 aaKnown RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 PCDHGA12O60330 932 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 LSM8O95777 96 aaKnown RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 GLDCP23378 1020 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 RRM1P23921 792 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 SCNN1AP37088 669 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 GRK6P43250 576 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 VASPP50552 380 aaPredicted RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 KRT31Q15323 416 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 RAB6CQ53S08 254 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 CT47A1Q5JQC4 288 aaPredicted RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 FAM46CQ5VWP2 391 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 LRRC31Q6UY01 552 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 LINGO4Q6UY18 593 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 FAM131BQ86XD5 332 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 ENOX1Q8TC92 643 aaKnown RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 ELF4Q99607 663 aaPredicted RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 RAB6CQ9H0N0 254 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 NLRC4Q9NPP4 1024 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 METTL5Q9NRN9 209 aaKnown RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 FAM207AQ9NSI2 230 aaPredicted RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 NOCTQ9UK39 431 aaKnown RBP19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 LAMA5O15230 3695 aa19.49■□□□□ 0.71
TM6SF1-201ENST00000258909 C1QTNF3-AMACRE9PGA6 284 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 RNF103O00237 685 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 EPHB6O15197 1021 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 PLRG1O43660 514 aaKnown RBP19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 CTSLP07711 333 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 POLR2FP61218 127 aaKnown RBP19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 KRT83P78385 493 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 ATP11AP98196 1134 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 SCAPQ12770 1279 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 SHBQ15464 509 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 ARTNQ5T4W7 220 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 AGBL4Q5VU57 503 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 CDKAL1Q5VV42 579 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 CCNI2Q6ZMN8 369 aaPredicted RBP19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 OR7D4Q8NG98 312 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 GPT2Q8TD30 523 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 FAM131CQ96AQ9 280 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 SKA1Q96BD8 255 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 C2orf49Q9BVC5 232 aaPredicted RBP19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 ARHGAP20Q9P2F6 1191 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 HS3ST2Q9Y278 367 aa19.48■□□□□ 0.71
TM6SF1-201ENST00000258909 PAXBP1Q9Y5B6 917 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms