RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CTNNB1P35222 781 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 BMPR1AP36894 532 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 WDR4P57081 412 aaKnown RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 LGSNQ5TDP6 509 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 TRMT10BQ6PF06 316 aaKnown RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 ZNF461Q8TAF7 563 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 FATE1Q969F0 183 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 TTC17Q96AE7 1141 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 PPP1R2P1Q96PQ5 205 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 C17orf80Q9BSJ5 609 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 MRPL17Q9NRX2 175 aaKnown RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 SYBUQ9NX95 663 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 TNRC18O15417 2968 aaPredicted RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 AP3B1O00203 1094 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 LILRB3O75022 631 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 KRT37O76014 449 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 ASMTLO95671 621 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 GKAP1Q5VSY0 366 aaPredicted RBP28.24■■■□□ 2.11
CCM2-201ENST00000258781 OR52K1Q8NGK4 314 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 GDAP1Q8TB36 358 aa28.24■■■□□ 2.11
CCM2-201ENST00000258781 TRIM56Q9BRZ2 755 aaKnown RBP28.24■■■□□ 2.11
CCM2-201ENST00000258781 ALG13Q9NP73 1137 aaKnown RBP28.24■■■□□ 2.11
CCM2-201ENST00000258781 VIMP08670 466 aaKnown RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 CTSAP10619 480 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 NAB1Q13506 487 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 ZNF449Q6P9G9 518 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 MICALCLQ6ZW33 695 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 NOL6Q9H6R4 1146 aaKnown RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 BFARQ9NZS9 450 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 SAMD15Q9P1V8 674 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 DRGXA6NNA5 263 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 SNRPAP09012 282 aaKnown RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 RPA3P35244 121 aaPredicted RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 PAPOLAP51003 745 aaKnown RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 CRADDP78560 199 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 CRYMQ14894 314 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 ANO4Q32M45 955 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 BANPQ8N9N5 519 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 OXNAD1Q96HP4 312 aaPredicted RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 FCRL5Q96RD9 977 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 DNMT3LQ9UJW3 386 aa28.23■■■□□ 2.11
CCM2-201ENST00000258781 AAR2Q9Y312 384 aaKnown RBP28.23■■■□□ 2.11
CCM2-201ENST00000258781 MYO7AQ13402 2215 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 SEC24AO95486 1093 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 CSH1P0DML2 217 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 CSH2P0DML3 217 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 NPY2RP49146 381 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 SERPINB9P50453 376 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 SPANXN3Q5MJ09 141 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 NAPEPLDQ6IQ20 393 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 FBXL22Q6P050 247 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 MARK2Q7KZI7 788 aaKnown RBP28.22■■■□□ 2.11
CCM2-201ENST00000258781 LINC00523Q86TU6 105 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 CNPY4Q8N129 248 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 USP33Q8TEY7 942 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 MTBPQ96DY7 904 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 GLOD4Q9HC38 313 aa28.22■■■□□ 2.11
CCM2-201ENST00000258781 PIH1D1Q9NWS0 290 aaKnown RBP28.22■■■□□ 2.11
CCM2-201ENST00000258781 TM9SF1O15321 606 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 TEX28O15482 410 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 KRT38O76015 456 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 CSPG5O95196 566 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 POLBP06746 335 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 HMBSP08397 361 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 SLC18A2Q05940 514 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 RAP1GAP2Q684P5 730 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 KLHDC10Q6PID8 442 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 SEC16BQ96JE7 1060 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 IPO11Q9UI26 975 aaKnown RBP28.21■■■□□ 2.11
CCM2-201ENST00000258781 TCP11X1B4DZS4 312 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 ANXA9O76027 345 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 CA3P07451 260 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 ATP5C1P36542 298 aaKnown RBP28.21■■■□□ 2.11
CCM2-201ENST00000258781 NIPAL4Q0D2K0 466 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 RAB33AQ14088 237 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 FRG1Q14331 258 aaKnown RBP28.21■■■□□ 2.11
CCM2-201ENST00000258781 CACNA2D3Q8IZS8 1091 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 DNAAF3Q8N9W5 541 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 CDKL2Q92772 493 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 MYRFLQ96LU7 910 aa28.21■■■□□ 2.11
CCM2-201ENST00000258781 ATXN2Q99700 1313 aaKnown RBP28.2■■■□□ 2.11
CCM2-201ENST00000258781 TRIM49D1C9J1S8 452 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 USP12O75317 370 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 HMGA1P17096 107 aaKnown RBP28.2■■■□□ 2.1
CCM2-201ENST00000258781 DNAJB1P25685 340 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 CNTFP26441 200 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 ERVFC1P60507 584 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 OLIG2Q13516 323 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 SH2D5Q6ZV89 423 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 OTOP3Q7RTS5 596 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 PIGWQ7Z7B1 504 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 IGSF8Q969P0 613 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 SERAC1Q96JX3 654 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 ZNF512Q96ME7 567 aaPredicted RBP28.2■■■□□ 2.1
CCM2-201ENST00000258781 TGS1Q96RS0 853 aaKnown RBP28.2■■■□□ 2.1
CCM2-201ENST00000258781 STK39Q9UEW8 545 aa28.2■■■□□ 2.1
CCM2-201ENST00000258781 TRANK1O15050 2925 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 ZNF840PA6NDX5 716 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 CNTN5O94779 1100 aa28.19■■■□□ 2.1
CCM2-201ENST00000258781 CA8P35219 290 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms