RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 FBXO25Q8TCJ0 367 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PDP2Q9P2J9 529 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ZNHIT2Q9UHR6 403 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF510Q9Y2H8 683 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 NUDT14O95848 222 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PECAM1P16284 738 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PAX3P23760 479 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PSEN1P49768 467 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 IL5RAQ01344 420 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ADRM1Q16186 407 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ZC3H12AQ5D1E8 599 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DCLRE1AQ6PJP8 1040 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 COMMD2Q86X83 199 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DEFB107AQ8IZN7 70 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CAMKK1Q8N5S9 505 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DNAJC1Q96KC8 554 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 RERGLQ9H628 205 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 C10orf88Q9H8K7 445 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 GIT1Q9Y2X7 761 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 AP4S1Q9Y587 144 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 MMP3P08254 477 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINB3P29508 390 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINB1P30740 379 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 HOXA10P31260 410 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF143P52747 638 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 COX10Q12887 443 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 KPNB1Q14974 876 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 POM121L1PQ3SYA9 428 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CYB5D1Q6P9G0 228 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CASP12Q6UXS9 341 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 KCNK18Q7Z418 384 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DPP10Q8N608 796 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 HJURPQ8NCD3 748 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PPTC7Q8NI37 304 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PPP1R14AQ96A00 147 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ATP13A3Q9H7F0 1226 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 BPIFA1Q9NP55 256 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 OR12D3Q9UGF7 316 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 RABGEF1Q9UJ41 708 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 MAGEC1O60732 1142 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ETS1P14921 441 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CD52P31358 61 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 C21orf59P57076 290 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 FAAP100Q0VG06 881 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CAPSQ13938 189 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 GRIK5Q16478 980 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SLC35C1Q96A29 364 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 IL22Q9GZX6 179 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 RHBGQ9H310 441 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ARL15Q9NXU5 204 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 MON2Q7Z3U7 1717 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 NOS3P29474 1203 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SKP1P63208 163 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PFKPQ01813 784 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 DHFR2Q86XF0 187 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SPPL2AQ8TCT8 520 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 CD248Q9HCU0 757 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 PRKAG3Q9UGI9 489 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 SLC27A5Q9Y2P5 690 aa8.84□□□□□ -0.99
PTCD3-201ENST00000254630 ANKDD1BA6NHY2 528 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FAM25AB3EWG3 89 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FAM25CB3EWG5 89 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FAM25GB3EWG6 89 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 EPN2O95208 641 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CYP1A1P04798 512 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 ABL2P42684 1182 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 GPR1P46091 355 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CSNK2BP67870 215 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 DEFB115Q30KQ5 88 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TCHHL1Q5QJ38 904 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 CCDC103Q8IW40 242 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 RGL4Q8IZJ4 473 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ACTRT2Q8TDY3 377 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TMEM79Q9BSE2 394 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MLPHQ9BV36 600 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 LACRTQ9GZZ8 138 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 DLGAP2Q9P1A6 1054 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ATP6V1HQ9UI12 483 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ASTN2O75129 1339 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 CNOT3O75175 753 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 GUCY1B2O75343 617 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MT-CO1P00395 513 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 LTA4HP09960 611 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 RPA3P35244 121 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 TBX2Q13207 712 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 C1DQ13901 141 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 TOMM20Q15388 145 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 AADACL2Q6P093 401 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 EPHX4Q8IUS5 362 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TRPC4APQ8TEL6 797 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FERD3LQ96RJ6 166 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ADI1Q9BV57 179 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SEMA4BQ9NPR2 832 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 ST3GAL5Q9UNP4 418 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 F8VP50 259 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms