RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TJP3O95049 919 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 CD72P21854 359 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 ACVRL1P37023 503 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 MAGEA9P43362 315 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 PAPOLAP51003 745 aaKnown RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 MRPS21P82921 87 aaKnown RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 ECT2LQ008S8 904 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 GBE1Q04446 702 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 SLC20A2Q08357 652 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 SLC10A2Q12908 348 aaPredicted RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 ZNF211Q13398 564 aaPredicted RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 PTPRNQ16849 979 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 SEL1L2Q5TEA6 688 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 CWF19L1Q69YN2 538 aaKnown RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 AADACL2Q6P093 401 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 BZW1Q7L1Q6 419 aaKnown RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 SFTPA1Q8IWL2 248 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 UCMAQ8WVF2 138 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 MYO19Q96H55 970 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 PBKQ96KB5 322 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 MRGPRX3Q96LB0 322 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 TSGA13Q96PP4 275 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 NAPGQ99747 312 aaPredicted RBP14.43□□□□□ -0.1
VPS25-201ENST00000253794 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 PDFQ9HBH1 243 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 ATP13A1Q9HD20 1204 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 VPS51Q9UID3 782 aa14.43□□□□□ -0.1
VPS25-201ENST00000253794 CTAGE9A4FU28 777 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 PRAMEF11O60813 436 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 TCP1P17987 556 aaKnown RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 MX2P20592 715 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 CLCN6P51797 869 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 GEMIN4P57678 1058 aaKnown RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 ARF5P84085 180 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 RETSATQ6NUM9 610 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 METTL3Q86U44 580 aaKnown RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 SLC13A5Q86YT5 568 aaPredicted RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 CASKIN2Q8WXE0 1202 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 HDAC11Q96DB2 347 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 CELF6Q96J87 481 aaKnown RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 ZNF599Q96NL3 588 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 OSBPL9Q96SU4 736 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 FOXQ1Q9C009 403 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 DLGAP2Q9P1A6 1054 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 NDRG2Q9UN36 371 aaKnown RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 ERVW-1Q9UQF0 538 aa14.42□□□□□ -0.1
VPS25-201ENST00000253794 MTF2Q9Y483 593 aaPredicted RBP14.42□□□□□ -0.1
VPS25-201ENST00000253794 FAM170BA6NMN3 283 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 KIF2AO00139 706 aaPredicted RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 ATP9BO43861 1147 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 SNAP91O60641 907 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 MAFKO60675 156 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 CD160O95971 181 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 C7P10643 843 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 AOC1P19801 751 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 GARSP41250 739 aaKnown RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 DNA2P51530 1060 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 CLCN5P51795 746 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 IL10RBQ08334 325 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 PPIDQ08752 370 aaKnown RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 UBXN2BQ14CS0 331 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 INO80DQ53TQ3 878 aaPredicted RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 TMCO4Q5TGY1 634 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 KAZNQ674X7 775 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 IL31Q6EBC2 164 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 TRMT11Q7Z4G4 463 aaKnown RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 TP53INP2Q8IXH6 220 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 TTC13Q8NBP0 860 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 GABRG3Q99928 467 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 HEMGNQ9BXL5 484 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 FRMD8P1Q9BZ68 369 aaPredicted RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 CIPCQ9C0C6 399 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 CHRDQ9H2X0 955 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 TMEM245Q9H330 911 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 LMAN1LQ9HAT1 526 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 IPO11Q9UI26 975 aaKnown RBP14.41□□□□□ -0.1
VPS25-201ENST00000253794 SLC25A13Q9UJS0 675 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 HPCAL4Q9UM19 191 aa14.41□□□□□ -0.1
VPS25-201ENST00000253794 CBX4O00257 560 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 DFFAO00273 331 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 RNF40O75150 1001 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ZNF189O75820 626 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 PEX11BO96011 259 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 GLDCP23378 1020 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 CCNCP24863 283 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 CTSOP43234 321 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 SERPINH1P50454 418 aaKnown RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 DYNLT1P63172 113 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 XRCC4Q13426 336 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ZNF234Q14588 700 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 RFTN1Q14699 578 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 PDK1Q15118 436 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 SIX1Q15475 284 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 EGFLAMQ63HQ2 1017 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 NPNTQ6UXI9 565 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms