RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 TSEN2Q8NCE0 465 aaKnown RBP15.25■□□□□ 0.03
UBE4B-201ENST00000253251 MCOLN3Q8TDD5 553 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 COMMD8Q9NX08 183 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.25■□□□□ 0.035e-7■□□□□ 11.2
UBE4B-201ENST00000253251 NCKAP1Q9Y2A7 1128 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 SPACA6W5XKT8 324 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 A0A1W2PQ67 120 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 ZNF839A8K0R7 811 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 VNN1O95497 513 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 GJA9P57773 515 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 NPLOC4Q8TAT6 608 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 TAGLN3Q9UI15 199 aa15.25■□□□□ 0.03
UBE4B-201ENST00000253251 FAM95CA0A1B0GW59 222 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 RAP1GDS1P52306 607 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 TAF10Q12962 218 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 SGCGQ13326 291 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 ECHDC2Q86YB7 292 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 OR56A4Q8NGH8 313 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 PTCD2Q8WV60 388 aaKnown RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 RXFP1Q9HBX9 757 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 LTBP4Q8N2S1 1624 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 MYH3P11055 1940 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 DGKAP23743 735 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CD86P42081 329 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CDKN2BP42772 138 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 TTPAP49638 278 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 SLC5A3P53794 718 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 TGM3Q08188 693 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 C2CD4BA6NLJ0 364 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 TBL1XO60907 577 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 WASHC5Q12768 1159 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 FNDC3BQ53EP0 1204 aaKnown RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 PMF1Q6P1K2 205 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 LCA5Q86VQ0 697 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 OSCP1Q8WVF1 389 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 TMEM120AQ9BXJ8 343 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CDHR5Q9HBB8 845 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 STX18Q9P2W9 335 aaKnown RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 SLC1A6P48664 564 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 DUSP4Q13115 394 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CCL14Q16627 93 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 DQX1Q8TE96 717 aaKnown RBP15.24■□□□□ 0.03
UBE4B-201ENST00000253251 P2RY11Q96G91 374 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 COG4Q9H9E3 785 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 AURKCQ9UQB9 309 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
UBE4B-201ENST00000253251 A0A1W2PQH9 124 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 GCKP35557 465 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 TARBP2Q15633 366 aaKnown RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 SGO1Q5FBB7 561 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 MCRS1Q96EZ8 462 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 SEMA3CQ99985 751 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 IRS2Q9Y4H2 1338 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 SKAP2O75563 359 aaPredicted RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 WEE1P30291 646 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 CORO7P57737 925 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 AUHQ13825 339 aaKnown RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 DAB2IPQ5VWQ8 1189 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 TFAP2BQ92481 460 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 KAT2BQ92831 832 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 SHISA4Q96DD7 197 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 GLOD4Q9HC38 313 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 ZMYM5Q9UJ78 669 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 COG5Q9UP83 839 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 SQORQ9Y6N5 450 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 TTC36A6NLP5 189 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 C1QTNF3-AMACRE9PGA6 284 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 KATNA1O75449 491 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 ETS1P14921 441 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 DAOAP59103 153 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 IFI35P80217 286 aaPredicted RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 CDK18Q07002 472 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 CYLC2Q14093 348 aaPredicted RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 TEX44Q53QW1 395 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 RDH11Q8TC12 318 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 QKIQ96PU8 341 aaKnown RBP eCLIP15.23■□□□□ 0.036e-8■■■■■ 41.5
UBE4B-201ENST00000253251 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 ACTR8Q9H981 624 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 CYP4F12Q9HCS2 524 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 AHSPQ9NZD4 102 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 KCNA3P22001 575 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 CCNG1P51959 295 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 HK2P52789 917 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 IL2P60568 153 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 PURAQ00577 322 aaKnown RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 FSTL1Q12841 308 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 MPPE1Q53F39 396 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 RIN3Q8TB24 985 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 MAGEC3Q8TD91 643 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
UBE4B-201ENST00000253251 FAM84AQ96KN4 292 aa15.23■□□□□ 0.03
UBE4B-201ENST00000253251 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms