RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ZDHHC7Q9NXF8 308 aa14.5□□□□□ -0.09
SDF2-201ENST00000247020 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.5□□□□□ -0.09
SDF2-201ENST00000247020 EXOC1LA0A1B0GW35 172 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 TYW5A2RUC4 315 aaKnown RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 TRDMT1O14717 391 aaKnown RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 GRM6O15303 877 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 CLASP2O75122 1294 aaKnown RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 XYLBO75191 536 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 NR1D1P20393 614 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ETFBP38117 255 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 MAGEA10P43363 369 aaPredicted RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 GPX6P59796 221 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 TMCO4Q5TGY1 634 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 TXNDC8Q6A555 127 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 NAPEPLDQ6IQ20 393 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 KDM7AQ6ZMT4 941 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ARHGAP36Q6ZRI8 547 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 C3orf62Q6ZUJ4 267 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 HTR3DQ70Z44 454 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 CYS1Q717R9 158 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ANKMY2Q8IV38 441 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 TEX26Q8N6G2 289 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 CNTD1Q8N815 330 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ARL14EPQ8N8R7 260 aaPredicted RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 UHMK1Q8TAS1 419 aaKnown RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 EPS8L3Q8TE67 593 aaKnown RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 SLC22A17Q8WUG5 538 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 GORASP1Q9BQQ3 440 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ATXN3LQ9H3M9 355 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 CENPHQ9H3R5 247 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 GLOD4Q9HC38 313 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 MAN1C1Q9NR34 630 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 EURLQ9NYK6 297 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ADAM21Q9UKJ8 722 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 CHMP2BQ9UQN3 213 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ZFP37Q9Y6Q3 630 aaPredicted RBP14.49□□□□□ -0.09
SDF2-201ENST00000247020 MIA3Q5JRA6 1907 aa14.49□□□□□ -0.09
SDF2-201ENST00000247020 ILVBLA1L0T0 632 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 SDR42E2A6NKP2 422 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 GFRA2O00451 464 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 BANF1O75531 89 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 NEBLO76041 1014 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 PAPLNO95428 1278 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 PEX11BO96011 259 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 CPP00450 1065 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 STX2P32856 288 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 GEMP55040 296 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 SKOR1P84550 965 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 NR1H3Q13133 447 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 GPM6BQ13491 265 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 SHHQ15465 462 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 LONRF1Q17RB8 773 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 KCTD16Q68DU8 428 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 TAOK1Q7L7X3 1001 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 HS6ST3Q8IZP7 471 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 CPXM2Q8N436 756 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 ADAMTS19Q8TE59 1207 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 ARHGEF2Q92974 986 aaKnown RBP14.48□□□□□ -0.09
SDF2-201ENST00000247020 PRICKLE1Q96MT3 831 aaPredicted RBP14.48□□□□□ -0.09
SDF2-201ENST00000247020 CYTH2Q99418 400 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
SDF2-201ENST00000247020 CORO1BQ9BR76 489 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 CASS4Q9NQ75 786 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 PSD3Q9NYI0 1048 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 ZC3H7BQ9UGR2 993 aaKnown RBP14.48□□□□□ -0.09
SDF2-201ENST00000247020 RABGEF1Q9UJ41 708 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 TBC1D30Q9Y2I9 924 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 CPQQ9Y646 472 aa14.48□□□□□ -0.09
SDF2-201ENST00000247020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 TLDC2A0PJX2 215 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 CCL16O15467 120 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 GREM1O60565 184 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 PRAMEF11O60813 436 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 ARHGEF15O94989 841 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 CKMP06732 381 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 IRF1P10914 325 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 MYOGP15173 224 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 SSTR1P30872 391 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 IRS1P35568 1242 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 CYP4F8P98187 520 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 GNA12Q03113 381 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 ZNF177Q13360 481 aaPredicted RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 ARHGAP15Q53QZ3 475 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 MARC1Q5VT66 337 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 RFWD3Q6PCD5 774 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 MAB21L3Q8N8X9 362 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 HJURPQ8NCD3 748 aaPredicted RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 SLC22A12Q96S37 553 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 SLC25A51Q9H1U9 297 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 RBM22Q9NW64 420 aaKnown RBP eCLIP14.47□□□□□ -0.09
SDF2-201ENST00000247020 BCCIPQ9P287 314 aaKnown RBP eCLIP14.47□□□□□ -0.09
SDF2-201ENST00000247020 ARHGAP26Q9UNA1 814 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 NOVA2Q9UNW9 492 aaKnown RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 ACTL7BQ9Y614 415 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 NUP210Q8TEM1 1887 aaPredicted RBP14.47□□□□□ -0.09
SDF2-201ENST00000247020 A0A1W2PRU2 124 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 AVILO75366 819 aa14.47□□□□□ -0.09
SDF2-201ENST00000247020 HLA-DQB2P05538 268 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms