RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 HHLA1C9JL84 531 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CCNT2O60583 730 aaKnown RBP22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 F9P00740 461 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 MYL3P08590 195 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 ZNF865P0CJ78 1059 aaPredicted RBP22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CACNA2D1P54289 1103 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 MPP3Q13368 585 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 EPAS1Q99814 870 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CDH19Q9H159 772 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 SLC38A7Q9NVC3 462 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 COL4A4P53420 1690 aaPredicted RBP22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 ATP9BO43861 1147 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CXCR3P49682 368 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 IRF9Q00978 393 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 BTKQ06187 659 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 AAGABQ6PD74 315 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 DRAXINQ8NBI3 349 aaPredicted RBP22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 UCMAQ8WVF2 138 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 DPF3Q92784 378 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CMTM5Q96DZ9 223 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 IL22Q9GZX6 179 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 VCXQ9H320 206 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 CAB39LQ9H9S4 337 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 NDE1Q9NXR1 346 aa22.06■■□□□ 1.12
SH2D3A-201ENST00000245908 H2AFYO75367 372 aaKnown RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 UPP2O95045 317 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 C2P06681 752 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 F7P08709 466 aaPredicted RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 SP100P23497 879 aaPredicted RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 CPT1AP50416 773 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 DLG2Q15700 870 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 TMEM154Q6P9G4 183 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 EPGNQ6UW88 154 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 NAPRTQ6XQN6 538 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 CTU1Q7Z7A3 348 aaKnown RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 GSTCDQ8NEC7 633 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ITFG2Q969R8 447 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 TEKT5Q96M29 485 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 OXCT2Q9BYC2 517 aaPredicted RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 C20orf96Q9NUD7 363 aaPredicted RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 HSPA4LO95757 839 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 YBX3P16989 372 aaKnown RBP eCLIP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 PRDX6P30041 224 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 HOXC8P31273 242 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 PGM2L1Q6PCE3 622 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ADGRG6Q86SQ4 1221 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ZNF781Q8N8C0 355 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ZSCAN18Q8TBC5 510 aaPredicted RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ACTRT2Q8TDY3 377 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 SREK1Q8WXA9 508 aaKnown RBP22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 FAM210AQ96ND0 272 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 WDCPQ9H6R7 721 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 COG4Q9H9E3 785 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 CHRAC1Q9NRG0 131 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 OR12D3Q9UGF7 316 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 CDH9Q9ULB4 789 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 SNX10Q9Y5X0 201 aa22.05■■□□□ 1.12
SH2D3A-201ENST00000245908 ARHGAP42A6NI28 874 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 MEIS3P2A8K0S8 358 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 ABCG1P45844 678 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 CSRP3P50461 194 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 RALGPS1Q5JS13 557 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 MORN1Q5T089 497 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 SLC25A41Q8N5S1 370 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 SHKBP1Q8TBC3 707 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 VPS39Q96JC1 886 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 APOL2Q9BQE5 337 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 TKTL2Q9H0I9 626 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 NMRAL1Q9HBL8 299 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 IARS2Q9NSE4 1012 aaKnown RBP22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 FLRT1Q9NZU1 646 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 PPM1HQ9ULR3 514 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 NUP205Q92621 2012 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 AP3B1O00203 1094 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 TRIM13O60858 407 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 HADHAP40939 763 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 USP4Q13107 963 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 PM20D1Q6GTS8 502 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 KLHDC8BQ8IXV7 354 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 SMARCD1Q96GM5 515 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 TRAPPC9Q96Q05 1148 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 PTPN18Q99952 460 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 KATNAL1Q9BW62 490 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 MID2Q9UJV3 735 aa22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 TIMM13Q9Y5L4 95 aaPredicted RBP22.04■■□□□ 1.12
SH2D3A-201ENST00000245908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 MAP3K13O43283 966 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 LRIG2O94898 1065 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 NCF2P19878 526 aaPredicted RBP22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 BEX3Q00994 111 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 CDH17Q12864 832 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 MAP2K5Q13163 448 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 FSCBQ5H9T9 825 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 NAPEPLDQ6IQ20 393 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 EDEM1Q92611 657 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 IFT43Q96FT9 208 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 TTC1Q99614 292 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 GPR22Q99680 433 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 S100A14Q9HCY8 104 aa22.03■■□□□ 1.12
SH2D3A-201ENST00000245908 FNDC1Q4ZHG4 1894 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms