RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ZNF669Q96BR6 464 aaPredicted RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 BTN2A3PQ96KV6 586 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 KLHL14Q9P2G3 628 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 PPARGC1AQ9UBK2 798 aaKnown RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 CAPN7Q9Y6W3 813 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 IGLV3-10A0A075B6K4 115 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 ATP9BO43861 1147 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 UPP2O95045 317 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 MT-CYBP00156 380 aaPredicted RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 RHOQP17081 205 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 TPH1P17752 444 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 ATF6P18850 670 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 SERPINB4P48594 390 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 RPL10AP62906 217 aaKnown RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 TLE2Q04725 743 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 CDH17Q12864 832 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 SMAD1Q15797 465 aaKnown RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 ALFQ53S48 1182 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 TIGD7Q6NT04 549 aaPredicted RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 RASSF3Q86WH2 238 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 NDUFAF2Q8N183 169 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 THOC1Q96FV9 657 aaKnown RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 VN1R3Q9BXE9 311 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 ZYG11BQ9C0D3 744 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 IL22Q9GZX6 179 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 IQCGQ9H095 443 aaKnown RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 PCMTD2Q9NV79 361 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 ZFATQ9P243 1243 aa18.85■□□□□ 0.61
HOXC11-201ENST00000243082 AAR2Q9Y312 384 aaKnown RBP18.85■□□□□ 0.61
HOXC11-201ENST00000243082 FAM237BA0A1B0GVD1 139 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 SLC12A8A0AV02 714 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 MAGEB16A2A368 324 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 SLC38A8A6NNN8 435 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 CNTN5O94779 1100 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 ALDOAP04075 364 aaKnown RBP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 HLA-DQB2P05538 268 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 CRHR1P34998 444 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 ALDH7A1P49419 539 aaKnown RBP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 SLC8B1Q6J4K2 584 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 FBXL22Q6P050 247 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 LINC00523Q86TU6 105 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 MFSD3Q96ES6 412 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 CWH43Q9H720 699 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 CCSER2Q9H7U1 834 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 CHRAC1Q9NRG0 131 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 RBM22Q9NW64 420 aaKnown RBP eCLIP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 TMEM248Q9NWD8 314 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 MTRRQ9UBK8 725 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 IPO11Q9UI26 975 aaKnown RBP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 SLC12A4Q9UP95 1085 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 PEX11BO96011 259 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 NDST2P52849 883 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 TRIM60Q495X7 471 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 GALNTL6Q49A17 601 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 TFAP2DQ7Z6R9 452 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 RNF168Q8IYW5 571 aaPredicted RBP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 FITM2Q8N6M3 262 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 IGSF8Q969P0 613 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 VWCEQ96DN2 955 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 TOX2Q96NM4 488 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 HAUS2Q9NVX0 235 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 SOX13Q9UN79 622 aa18.84■□□□□ 0.61
HOXC11-201ENST00000243082 MAGED2Q9UNF1 606 aaPredicted RBP18.84■□□□□ 0.61
HOXC11-201ENST00000243082 AP3B1O00203 1094 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 ANXA9O76027 345 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 UBOX5O94941 541 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 HMBSP08397 361 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 ITGA2BP08514 1039 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.61
HOXC11-201ENST00000243082 USP41Q3LFD5 358 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 RAP1GAP2Q684P5 730 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 TBL1YQ9BQ87 522 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 TTLL2Q9BWV7 592 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 DOCK4Q8N1I0 1966 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 MICAL3Q7RTP6 2002 aa18.83■□□□□ 0.61
HOXC11-201ENST00000243082 DRGXA6NNA5 263 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 GSTA1P08263 222 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 BGNP21810 368 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 GP5P40197 560 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 RING1Q06587 406 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 FAM133BQ5BKY9 247 aaKnown RBP18.83■□□□□ 0.6
HOXC11-201ENST00000243082 DENND5AQ6IQ26 1287 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 ANKLE1Q8NAG6 615 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 ARMC2Q8NEN0 867 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 ACMSDQ8TDX5 336 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 CPNE1Q99829 537 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 UBE2OQ9C0C9 1292 aaKnown RBP18.83■□□□□ 0.6
HOXC11-201ENST00000243082 RXFP1Q9HBX9 757 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF212Q9UDV6 495 aa18.83■□□□□ 0.6
HOXC11-201ENST00000243082 TPP1O14773 563 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 TLR5O60602 858 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 TOP3BO95985 862 aaKnown RBP18.82■□□□□ 0.6
HOXC11-201ENST00000243082 DNAJB2P25686 324 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 OR1D2P34982 312 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 ADRA1AP35348 466 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 TEDDM1Q5T9Z0 273 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms