RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 MPP3Q13368 585 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 MYLK4Q86YV6 388 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 CCNYL1Q8N7R7 359 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 TDRD5Q8NAT2 981 aaKnown RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 USP13Q92995 863 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 TMEM209Q96SK2 561 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 CPNE1Q99829 537 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 SLC2A6Q9UGQ3 507 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 TTC24A2A3L6 582 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 RRN3P2A6NIE6 340 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 G3V2L1 256 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 AP2A1O95782 977 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 POMCP01189 267 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 SPRP35270 261 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 GARSP41250 739 aaKnown RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 SCNN1GP51170 649 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 NAGLUP54802 743 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 DAOAP59103 153 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 TRMT5Q32P41 509 aaKnown RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 FAM35AQ86V20 835 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 LENG8Q96PV6 779 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 GATA5Q9BWX5 397 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 NMRAL1Q9HBL8 299 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 ZNF212Q9UDV6 495 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 ADAMTS6Q9UKP5 1117 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 AK5Q9Y6K8 562 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 TXNDC9O14530 226 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 F2P00734 622 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 TCN1P20061 433 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 ITGAXP20702 1163 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 PEX2P28328 305 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 PKNOX1P55347 436 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 MRPS35P82673 323 aaKnown RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 PDCD2Q16342 344 aaPredicted RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 PCSK7Q16549 785 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 NDFIP2Q9NV92 336 aa17.17■□□□□ 0.34
SSPN-201ENST00000242729 RPL26L1Q9UNX3 145 aaKnown RBP17.17■□□□□ 0.34
SSPN-201ENST00000242729 PMPCBO75439 489 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 VAPBO95292 243 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 TBL3Q12788 808 aaKnown RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 CDC16Q13042 620 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 CCNIQ14094 377 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 USP10Q14694 798 aaKnown RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 PAFAH1B3Q15102 231 aaKnown RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 FOXB2Q5VYV0 432 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 CNTD1Q8N815 330 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 NT5C3BQ969T7 300 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 TUBGCP5Q96RT8 1024 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 SFMBT1Q9UHJ3 866 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 CDH22Q9UJ99 828 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 ZNF487B1APH4 448 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 STX16-NPEPL1H3BU86 382 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 CCL22O00626 93 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 STRNO43815 780 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 PNPLA4P41247 253 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 CHRNA4P43681 627 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 BRCC3P46736 316 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 RPL34P49207 117 aaKnown RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 PSEN2P49810 448 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 SERPINB8P50452 374 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 LIMK2P53671 638 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 SPANXN3Q5MJ09 141 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 GRTP1Q5TC63 336 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 CATSPER2Q96P56 530 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 IGSF9Q9P2J2 1179 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 GTF2IRD1Q9UHL9 959 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 SCOCQ9UIL1 159 aa17.16■□□□□ 0.34
SSPN-201ENST00000242729 RUVBL2Q9Y230 463 aaKnown RBP17.16■□□□□ 0.34
SSPN-201ENST00000242729 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 NEMP2A6NFY4 417 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 AURKAO14965 403 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 MT-CO1P00395 513 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 NUDT2P50583 147 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 SEPT6Q14141 434 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 GRB14Q14449 540 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 SFT2D3Q587I9 215 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
SSPN-201ENST00000242729 TAC4Q86UU9 113 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 FAM156AQ8NDB6 213 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 ACMSDQ8TDX5 336 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 FBXW11Q9UKB1 542 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 MYADML2A6NDP7 307 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 WARSP23381 471 aaKnown RBP17.15■□□□□ 0.34
SSPN-201ENST00000242729 GRIA4P48058 902 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 POLE2P56282 527 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 DSG1Q02413 1049 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 IQSEC1Q6DN90 963 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 SLC2A13Q96QE2 648 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 ECSITQ9BQ95 431 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 SUDS3Q9H7L9 328 aaPredicted RBP17.15■□□□□ 0.34
SSPN-201ENST00000242729 S100A14Q9HCY8 104 aa17.15■□□□□ 0.34
SSPN-201ENST00000242729 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms