RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PRKAG3Q9UGI9 489 aa23.74■■□□□ 1.39
MSX2-201ENST00000239243 PAPOLAP51003 745 aaKnown RBP23.73■■□□□ 1.39
MSX2-201ENST00000239243 GEMP55040 296 aa23.73■■□□□ 1.39
MSX2-201ENST00000239243 MROH9Q5TGP6 573 aa23.73■■□□□ 1.39
MSX2-201ENST00000239243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.73■■□□□ 1.39
MSX2-201ENST00000239243 ZNF276Q8N554 614 aa23.73■■□□□ 1.39
MSX2-201ENST00000239243 PPM1EQ8WY54 764 aa23.73■■□□□ 1.39
MSX2-201ENST00000239243 ZNF669Q96BR6 464 aaPredicted RBP23.73■■□□□ 1.39
MSX2-201ENST00000239243 FAM111AQ96PZ2 611 aa23.73■■□□□ 1.39
MSX2-201ENST00000239243 IPO11Q9UI26 975 aaKnown RBP23.73■■□□□ 1.39
MSX2-201ENST00000239243 SLC12A8A0AV02 714 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 FSBPO95073 299 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 TBX18O95935 607 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 RFC2P35250 354 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 OLIG2Q13516 323 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 KIAA1841Q6NSI8 718 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 CGB2Q6NT52 195 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 OTOP3Q7RTS5 596 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 C10orf67Q8IYJ2 551 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 RNF168Q8IYW5 571 aaPredicted RBP23.72■■□□□ 1.39
MSX2-201ENST00000239243 UNC5BQ8IZJ1 945 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 GBP7Q8N8V2 638 aaPredicted RBP23.72■■□□□ 1.39
MSX2-201ENST00000239243 ZNF784Q8NCA9 323 aaPredicted RBP23.72■■□□□ 1.39
MSX2-201ENST00000239243 PDZD8Q8NEN9 1154 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 IGSF21Q96ID5 467 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 CPNE1Q99829 537 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 MANSC1Q9H8J5 431 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 TLR5O60602 858 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 ATF6P18850 670 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 OVCA2Q8WZ82 227 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 CRISPLD2Q9H0B8 497 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 CWH43Q9H720 699 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 RBM22Q9NW64 420 aaKnown RBP eCLIP23.72■■□□□ 1.39
MSX2-201ENST00000239243 PLLPQ9Y342 182 aa23.72■■□□□ 1.39
MSX2-201ENST00000239243 HBS1LQ9Y450 684 aaKnown RBP23.72■■□□□ 1.39
MSX2-201ENST00000239243 HMX2A2RU54 273 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 GP5P40197 560 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 SF3A3Q12874 501 aaKnown RBP eCLIP23.71■■□□□ 1.39
MSX2-201ENST00000239243 ANKRD20A4Q4UJ75 823 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 RNF43Q68DV7 783 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 CCDC63Q8NA47 563 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 GIPC2Q8TF65 315 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 SPOCK2Q92563 424 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 TBL1YQ9BQ87 522 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 UBP1Q9NZI7 540 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 HSFX1Q9UBD0 423 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 TBX21Q9UL17 535 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 SOX13Q9UN79 622 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 OR1D2P34982 312 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 CRHR1P34998 444 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 LIG3P49916 1009 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 HNRNPDQ14103 355 aaKnown RBP23.71■■□□□ 1.39
MSX2-201ENST00000239243 GRTP1Q5TC63 336 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 FYB2Q5VWT5 728 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 CCDC117Q8IWD4 279 aaPredicted RBP23.71■■□□□ 1.39
MSX2-201ENST00000239243 TRIM42Q8IWZ5 723 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 SLCO1B3Q9NPD5 702 aa23.71■■□□□ 1.39
MSX2-201ENST00000239243 NYNRINQ9P2P1 1898 aaKnown RBP23.7■■□□□ 1.39
MSX2-201ENST00000239243 ATP9BO43861 1147 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
MSX2-201ENST00000239243 RENBPP51606 427 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 CERCAMQ5T4B2 595 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 NDUFAF2Q8N183 169 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 FCRL3Q96P31 734 aaPredicted RBP23.7■■□□□ 1.38
MSX2-201ENST00000239243 ENTPD7Q9NQZ7 604 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 HAUS2Q9NVX0 235 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 AFF4Q9UHB7 1163 aaKnown RBP23.7■■□□□ 1.38
MSX2-201ENST00000239243 MAGED2Q9UNF1 606 aaPredicted RBP23.7■■□□□ 1.38
MSX2-201ENST00000239243 DOCK4Q8N1I0 1966 aa23.7■■□□□ 1.38
MSX2-201ENST00000239243 WDR91A4D1P6 747 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 DRGXA6NNA5 263 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 GSTA1P08263 222 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 NEFHP12036 1026 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 SERPINB4P48594 390 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 ACTN3Q08043 901 aaPredicted RBP23.69■■□□□ 1.38
MSX2-201ENST00000239243 RAP1GAP2Q684P5 730 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 FBXL22Q6P050 247 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 ATP2A3Q93084 1043 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 APOL2Q9BQE5 337 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 NOL6Q9H6R4 1146 aaKnown RBP23.69■■□□□ 1.38
MSX2-201ENST00000239243 PCMTD2Q9NV79 361 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 ZCWPW2A0A1B0GU75 182 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 HLA-DQB2P05538 268 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 ERVK-10P10266 1014 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 CES3Q6UWW8 571 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 TFAP2DQ7Z6R9 452 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 NSMCE1Q8WV22 266 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 SLC13A1Q9BZW2 595 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 C12orf65Q9H3J6 166 aaKnown RBP23.69■■□□□ 1.38
MSX2-201ENST00000239243 CCSER2Q9H7U1 834 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 TMEM39AQ9NV64 488 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 DNMT3LQ9UJW3 386 aa23.69■■□□□ 1.38
MSX2-201ENST00000239243 CARNS1A5YM72 827 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ITGA2BP08514 1039 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ATP5C1P36542 298 aaKnown RBP23.68■■□□□ 1.38
MSX2-201ENST00000239243 STXBP5Q5T5C0 1151 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 SNX30Q5VWJ9 437 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ARMC3Q5W041 872 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 SPATA22Q8NHS9 363 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 RPRD1AQ96P16 312 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms