RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 LINC00523Q86TU6 105 aa24.29■■□□□ 1.48
RRP9-201ENST00000232888 IGDCC3Q8IVU1 814 aa24.29■■□□□ 1.48
RRP9-201ENST00000232888 LEMD2Q8NC56 503 aa24.29■■□□□ 1.48
RRP9-201ENST00000232888 TGS1Q96RS0 853 aaKnown RBP24.29■■□□□ 1.48
RRP9-201ENST00000232888 CYTH2Q99418 400 aa24.29■■□□□ 1.48
RRP9-201ENST00000232888 PCDHA11Q9Y5I1 949 aa24.29■■□□□ 1.48
RRP9-201ENST00000232888 NEBLO76041 1014 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 HNRNPA1P09651 372 aaKnown RBP eCLIP24.28■■□□□ 1.48
RRP9-201ENST00000232888 DDX6P26196 483 aaKnown RBP eCLIP24.28■■□□□ 1.48
RRP9-201ENST00000232888 EPHA5P54756 1037 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 GEMIN4P57678 1058 aaKnown RBP24.28■■□□□ 1.48
RRP9-201ENST00000232888 SERINC3Q13530 473 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 TXNDC8Q6A555 127 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 SETD3Q86TU7 594 aaPredicted RBP24.28■■□□□ 1.48
RRP9-201ENST00000232888 ARL14EPQ8N8R7 260 aaPredicted RBP24.28■■□□□ 1.48
RRP9-201ENST00000232888 ZNF599Q96NL3 588 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 GORASP1Q9BQQ3 440 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 SP110Q9HB58 689 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 RBM22Q9NW64 420 aaKnown RBP eCLIP24.28■■□□□ 1.48
RRP9-201ENST00000232888 EURLQ9NYK6 297 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 NUP205Q92621 2012 aa24.28■■□□□ 1.48
RRP9-201ENST00000232888 ANAPC1Q9H1A4 1944 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 TRAV19A0A0A6YYK7 116 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 PEX11BO96011 259 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 ERVK-21P61565 698 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 PPP2R2AP63151 447 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 TERF2Q15554 542 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 FAM182AQ5T1J6 154 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 NAPEPLDQ6IQ20 393 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 RFWD3Q6PCD5 774 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 ELMSAN1Q6PJG2 1045 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 AGGF1Q8N302 714 aaeCLIP24.27■■□□□ 1.48
RRP9-201ENST00000232888 TEX26Q8N6G2 289 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 FBF1Q8TES7 1133 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 CNOT10Q9H9A5 744 aaKnown RBP24.27■■□□□ 1.48
RRP9-201ENST00000232888 HAUS2Q9NVX0 235 aa24.27■■□□□ 1.48
RRP9-201ENST00000232888 LSM7Q9UK45 103 aaKnown RBP24.27■■□□□ 1.48
RRP9-201ENST00000232888 ZFP37Q9Y6Q3 630 aaPredicted RBP24.27■■□□□ 1.48
RRP9-201ENST00000232888 A0A1B0GVM2 712 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 TCAF2A6NFQ2 919 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 H3BNC9 293 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 GRM6O15303 877 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 POU2F2P09086 479 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 GEMP55040 296 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 MARC1Q5VT66 337 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 ZNF783Q6ZMS7 281 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 Q6ZNB5 142 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 HS6ST3Q8IZP7 471 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 CNPY4Q8N129 248 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 MYEOVQ96EZ4 313 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 STAMBPL1Q96FJ0 436 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 CYP2S1Q96SQ9 504 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 MLPHQ9BV36 600 aaPredicted RBP24.26■■□□□ 1.47
RRP9-201ENST00000232888 ATXN3LQ9H3M9 355 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 CASS4Q9NQ75 786 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 CPQQ9Y646 472 aa24.26■■□□□ 1.47
RRP9-201ENST00000232888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 ILVBLA1L0T0 632 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 IRF1P10914 325 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 PTPN2P17706 415 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 ETFBP38117 255 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 GRIA1P42261 906 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 NPY2RP49146 381 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 ZNF177Q13360 481 aaPredicted RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 CAMK1Q14012 370 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 FAM217AQ8IXS0 508 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 PRICKLE1Q96MT3 831 aaPredicted RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 XPO6Q96QU8 1125 aaKnown RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 SLC22A12Q96S37 553 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 CORO1BQ9BR76 489 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 DHRS4Q9BTZ2 278 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 SMPD4Q9NXE4 827 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 BFARQ9NZS9 450 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 ACTL7BQ9Y614 415 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 TCRBV9S1A1TA0A576 114 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 GREM1O60565 184 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 PRAMEF11O60813 436 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 CLASP2O75122 1294 aaKnown RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 GNA12Q03113 381 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 MTM1Q13496 603 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 C9orf50Q5SZB4 431 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 ARMC3Q5W041 872 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 STEAP4Q687X5 459 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 CAPN12Q6ZSI9 719 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 CIR1Q86X95 450 aaPredicted RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 CFAP52Q8N1V2 620 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 GSDMBQ8TAX9 411 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 USP33Q8TEY7 942 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 SLC22A17Q8WUG5 538 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 ARHGEF2Q92974 986 aaKnown RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 SLC25A51Q9H1U9 297 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 MAN1C1Q9NR34 630 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 PSMC3IPQ9P2W1 217 aaPredicted RBP24.25■■□□□ 1.47
RRP9-201ENST00000232888 ZMYM5Q9UJ78 669 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 TBC1D30Q9Y2I9 924 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 MAD1L1Q9Y6D9 718 aa24.25■■□□□ 1.47
RRP9-201ENST00000232888 MAGEB16A2A368 324 aa24.24■■□□□ 1.47
RRP9-201ENST00000232888 TYW5A2RUC4 315 aaKnown RBP24.24■■□□□ 1.47
RRP9-201ENST00000232888 F5H423 210 aaPredicted RBP24.24■■□□□ 1.47
RRP9-201ENST00000232888 CCL16O15467 120 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms