RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 HDAC11Q96DB2 347 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 MED10Q9BTT4 135 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 MAN1C1Q9NR34 630 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 NUP205Q92621 2012 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 YJEFN3A6XGL0 299 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 C9IYK1 514 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ATP9BO43861 1147 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 TRIM13O60858 407 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 F2P00734 622 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 FAM200BP0CF97 657 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 NFKB1P19838 968 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 HCAR3P49019 387 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 GJA9P57773 515 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 DAOAP59103 153 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 KIAA0319Q5VV43 1072 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 DPP9Q86TI2 863 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 TDRD5Q8NAT2 981 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 DNAJB3Q8WWF6 145 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 SREK1Q8WXA9 508 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 VPS39Q96JC1 886 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 NMRAL1Q9HBL8 299 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 IPPQ9Y573 584 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 TRIP12Q14669 1992 aaPredicted RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 GABRDO14764 452 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ZMPSTE24O75844 475 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 FBXO21O94952 628 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 LTFP02788 710 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 LRPAP1P30533 357 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 CSRP3P50461 194 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 METTL21CQ5VZV1 264 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ITPRIPL1Q6GPH6 555 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 HPS6Q86YV9 775 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 FBXW8Q8N3Y1 598 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 ACVR1CQ8NER5 493 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 RTKNQ9BST9 563 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 GATA5Q9BWX5 397 aaPredicted RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 EBF3Q9H4W6 596 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 C20orf96Q9NUD7 363 aaPredicted RBP16.59■□□□□ 0.25
LTBR-201ENST00000228918 FBXW11Q9UKB1 542 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 ADAMTS6Q9UKP5 1117 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
LTBR-201ENST00000228918 MAGEB16A2A368 324 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 PDHXO00330 501 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 MTSS1O43312 755 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 GLDCP23378 1020 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 NPY2RP49146 381 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 RABGGTBP53611 331 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 MTTPP55157 894 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 GALNT2Q10471 571 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 TCHHL1Q5QJ38 904 aaPredicted RBP16.58■□□□□ 0.25
LTBR-201ENST00000228918 IQSEC1Q6DN90 963 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 OR52B2Q96RD2 323 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 TUBGCP5Q96RT8 1024 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 APOL2Q9BQE5 337 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 TINF2Q9BSI4 451 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 TCF7L2Q9NQB0 619 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 CHRAC1Q9NRG0 131 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 IARS2Q9NSE4 1012 aaKnown RBP16.58■□□□□ 0.25
LTBR-201ENST00000228918 OXSMQ9NWU1 459 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 MID2Q9UJV3 735 aa16.58■□□□□ 0.25
LTBR-201ENST00000228918 MAGED2Q9UNF1 606 aaPredicted RBP16.58■□□□□ 0.25
LTBR-201ENST00000228918 GRB14Q14449 540 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
LTBR-201ENST00000228918 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 ACAD11Q709F0 780 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 GPRIN1Q7Z2K8 1008 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 GPR142Q7Z601 462 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
LTBR-201ENST00000228918 DDX50Q9BQ39 737 aaKnown RBP16.58■□□□□ 0.24
LTBR-201ENST00000228918 IL22Q9GZX6 179 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 VCX3BQ9H321 246 aa16.58■□□□□ 0.24
LTBR-201ENST00000228918 PTGESO14684 152 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 RNASEH1O60930 286 aaKnown RBP16.57■□□□□ 0.24
LTBR-201ENST00000228918 ZCCHC18P0CG32 403 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
LTBR-201ENST00000228918 MPSTP25325 297 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 SFT2D3Q587I9 215 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 EFCAB3Q8N7B9 438 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 DRAXINQ8NBI3 349 aaPredicted RBP16.57■□□□□ 0.24
LTBR-201ENST00000228918 AGR3Q8TD06 166 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 GPR22Q99680 433 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 DDIT4Q9NX09 232 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 FNDC1Q4ZHG4 1894 aaPredicted RBP16.57■□□□□ 0.24
LTBR-201ENST00000228918 APOA4P06727 396 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 CHRNGP07510 517 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 FAM163BP0C2L3 166 aa16.57■□□□□ 0.24
LTBR-201ENST00000228918 PEX2P28328 305 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms