RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAM72BQ86X60 149 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 GALNT15Q8N3T1 639 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 C10orf82Q8WW14 230 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 FCRL2Q96LA5 508 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 RPRD1AQ96P16 312 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CLSTN3Q9BQT9 956 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 CSNK1G1Q9HCP0 422 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 XPO7Q9UIA9 1087 aaKnown RBP11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
TNFAIP1-201ENST00000226225 LCHNA4D1U4 455 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 HHLA1C9JL84 531 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 LIN7AO14910 233 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ATP5HO75947 161 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 MYL4P12829 197 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 GSTT1P30711 240 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ARFIP2P53365 341 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 STAT4Q14765 748 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 PARP6Q2NL67 630 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 LRRC23Q53EV4 343 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 KBTBD2Q8IY47 623 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 TCP10LQ8TDR4 215 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 UBE2OQ9C0C9 1292 aaKnown RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 TEX28O15482 410 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 PAGE1O75459 146 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 CKMP06732 381 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 GDF10P55107 478 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 NR1H3Q13133 447 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 KDELC2Q7Z4H8 507 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ARHGAP18Q8N392 663 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 FBXO27Q8NI29 283 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 CCDC124Q96CT7 223 aaKnown RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 SERPINB11Q96P15 392 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ANK1P16157 1881 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 SLC38A8A6NNN8 435 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 MEI4A8MW99 385 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 PER2O15055 1255 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 INPPL1O15357 1258 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ACADSP16219 412 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZFXP17010 805 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 GJA1P17302 382 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 SCNN1BP51168 640 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 GORASP1Q9BQQ3 440 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZNF395Q9H8N7 513 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 FZD10Q9ULW2 581 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 MAD1L1Q9Y6D9 718 aa11.97□□□□□ -0.49
TNFAIP1-201ENST00000226225 FAM237BA0A1B0GVD1 139 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 ARHGAP42A6NI28 874 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 B2RBV5 119 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 LRIG2O94898 1065 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 PSMG1O95456 288 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 HAPLN1P10915 354 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 PPP2R5DQ14738 602 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZRSR2Q15696 482 aaKnown RBP11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 TMEM240Q5SV17 173 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 SCD5Q86SK9 330 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 ELMOD1Q8N336 334 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 C8orf48Q96LL4 319 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 RAD9AQ99638 391 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 ZNF670Q9BS34 389 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 RHBDL2Q9NX52 303 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 MTRRQ9UBK8 725 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 FBXW11Q9UKB1 542 aa11.96□□□□□ -0.49
TNFAIP1-201ENST00000226225 CCDC22O60826 627 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 BAIAP3O94812 1187 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 SEC24AO95486 1093 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 MBL2P11226 248 aaPredicted RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 BGNP21810 368 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 ATP5C1P36542 298 aaKnown RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 CCNFP41002 786 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 SKIV2L2P42285 1042 aaKnown RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 PTK6Q13882 451 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 PDK4Q16654 411 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 RAB41Q5JT25 222 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 CMTR2Q8IYT2 770 aaKnown RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 IRGQQ8WZA9 623 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 FAM111AQ96PZ2 611 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 CORO1BQ9BR76 489 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 TMEM120AQ9BXJ8 343 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 ATXN3LQ9H3M9 355 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 ARHGEF4Q9NR80 690 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 GKN1Q9NS71 199 aa11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 PIH1D1Q9NWS0 290 aaKnown RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 PPARGC1AQ9UBK2 798 aaKnown RBP11.96□□□□□ -0.5
TNFAIP1-201ENST00000226225 AFF4Q9UHB7 1163 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms