RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 URGCPQ8TCY9 931 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 LRRN4Q8WUT4 740 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 NRG4Q8WWG1 115 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TRIM56Q9BRZ2 755 aaKnown RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 PRDM12Q9H4Q4 367 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 LRRC4Q9HBW1 653 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 PRDM5Q9NQX1 630 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 COPG2Q9UBF2 871 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TRHDEQ9UKU6 1024 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 PCDHB7Q9Y5E2 793 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TRIM43BA6NCK2 446 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 PRR5-ARHGAP8B1AHC4 643 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 EEF2KO00418 725 aaKnown RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TIMP1P01033 207 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 EN2P19622 333 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 PSMB4P28070 264 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TYK2P29597 1187 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 ARHGAP8P85298 464 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 ADIGQ0VDE8 80 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 UPP1Q16831 310 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 OTUD1Q5VV17 481 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 STON2Q8WXE9 905 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 FAM149B1Q96BN6 582 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TRIM43Q96BQ3 446 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 UROC1Q96N76 676 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 VAT1Q99536 393 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 LPIN3Q9BQK8 851 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 FAM167BQ9BTA0 163 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 ZNF395Q9H8N7 513 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 SYBUQ9NX95 663 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 BFARQ9NZS9 450 aa25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 MARCOQ9UEW3 520 aaPredicted RBP25.42■■□□□ 1.66
RUNDC3A-201ENST00000225441 TDRD15B5MCY1 1934 aaKnown RBP25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 TMEM114B3SHH9 223 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 USP1O94782 785 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 AP2A1O95782 977 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 NPY2RP49146 381 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 HK2P52789 917 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 ABCE1P61221 599 aaKnown RBP25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 RPL10AP62906 217 aaKnown RBP25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 DEUP1Q05D60 604 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 RCN2Q14257 317 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 CNKSR3Q6P9H4 555 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 TMEM135Q86UB9 458 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 LCA5Q86VQ0 697 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 CMTM5Q96DZ9 223 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 PGAP3Q96FM1 320 aaPredicted RBP25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 RBBP8Q99708 897 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 PAAF1Q9BRP4 392 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 MAGEB5Q9BZ81 275 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 DDX43Q9NXZ2 648 aaKnown RBP25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 LRFN2Q9ULH4 789 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 CDY1Q9Y6F8 540 aa25.41■■□□□ 1.66
RUNDC3A-201ENST00000225441 RALBP11234 206 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 IGFBP6P24592 240 aaPredicted RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 DNAJB1P25685 340 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CPOXP36551 454 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PRKAA2P54646 552 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CSE1LP55060 971 aaKnown RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 KDSRQ06136 332 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 METTL21CQ5VZV1 264 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 RIPOR1Q6ZS17 1223 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 SIX6OS1Q8N1H7 587 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CCNYQ8ND76 341 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 C3orf58Q8NDZ4 430 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 VWCEQ96DN2 955 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 NR1H4Q96RI1 486 aaPredicted RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 ZNF184Q99676 751 aaPredicted RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 THTPAQ9BU02 230 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CASS4Q9NQ75 786 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 MFHAS1Q9Y4C4 1052 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 M0QYT0 321 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PSMD3O43242 534 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 APOA4P06727 396 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CPA3P15088 417 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PAX7P23759 505 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 ADRA1BP35368 520 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CPA2P48052 419 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 LIMK2P53671 638 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 MXRA7P84157 204 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PPIDQ08752 370 aaKnown RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 ITPRIPL1Q6GPH6 555 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PID1Q7Z2X4 250 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 ZNF778Q96MU6 729 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 EBF4Q9BQW3 602 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 NSMCE4AQ9NXX6 385 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 SLC7A8Q9UHI5 535 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 PCDHB12Q9Y5F1 795 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 RPS6KL1Q9Y6S9 549 aa25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.4■■□□□ 1.66
RUNDC3A-201ENST00000225441 CCNT2O60583 730 aaKnown RBP25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 ANPEPP15144 967 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 PTPN1P18031 435 aaKnown RBP25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 ITGB8P26012 769 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 TKTP29401 623 aaKnown RBP25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 SESN3P58005 492 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 SEMA3BQ13214 749 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 FSCBQ5H9T9 825 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 C16orf46Q6P387 395 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms