RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■■■ 120.6
LAMB1-201ENST00000222399 ERBB2P04626 1255 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 CAPSQ13938 189 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 HECTD3Q5T447 861 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 DPP10Q8N608 796 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 MTERF3Q96E29 417 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 TRIM17Q9Y577 477 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 LDLRP01130 860 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 LTA4HP09960 611 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ME2P23368 584 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 SAMD4BQ5PRF9 694 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 FGD2Q7Z6J4 655 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 NKAPQ8N5F7 415 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ANKRD52Q8NB46 1076 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 FAM45AQ8TCE6 357 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ZNF558Q96NG5 402 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 DUSP12Q9UNI6 340 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 MEI4A8MW99 385 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 FAM20BO75063 409 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 RPL9P32969 192 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ZDHHC6Q9H6R6 413 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 INPP4BO15327 924 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 RD3Q7Z3Z2 195 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 SVOPQ8N4V2 548 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 GDPD5Q8WTR4 605 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 BBS4Q96RK4 519 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 MORF4L1Q9UBU8 362 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 GNPTGQ9UJJ9 305 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ATG7O95352 703 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ATP4AP20648 1035 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 NEK3P51956 506 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 TCHHL1Q5QJ38 904 aaPredicted RBP13.81□□□□□ -0.2
LAMB1-201ENST00000222399 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 SKA1Q96BD8 255 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 ARL15Q9NXU5 204 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 CRYL1Q9Y2S2 319 aa13.81□□□□□ -0.2
LAMB1-201ENST00000222399 A0A088AWK7 358 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ATP9AO75110 1047 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 USP12O75317 370 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SMNDC1O75940 238 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■□□□□ 11.1
LAMB1-201ENST00000222399 ITGAVP06756 1048 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZNF10P21506 573 aaPredicted RBP13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SNRPD1P62314 119 aaKnown RBP13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SKP1P63208 163 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ARMCX4Q5H9R4 360 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 FBXL19Q6PCT2 694 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 FOXR2Q6PJQ5 311 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 IL27RAQ6UWB1 636 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 NPNTQ6UXI9 565 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CASP12Q6UXS9 341 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SETD9Q8NE22 299 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 OR52K1Q8NGK4 314 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 TRPC4APQ8TEL6 797 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SUSD6Q92537 303 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 USP7Q93009 1102 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 QRFPRQ96P65 431 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZNF670Q9BS34 389 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SNRNP25Q9BV90 132 aaKnown RBP13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZYG11BQ9C0D3 744 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 GUCY1B2O75343 617 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZSCAN5DPP0CG00 497 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ADRA1DP25100 572 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 S100A3P33764 101 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 UTP15Q8TED0 518 aaKnown RBP13.8□□□□□ -0.2
LAMB1-201ENST00000222399 RNF157Q96PX1 679 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 APOL4Q9BPW4 351 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZSCAN32Q9NX65 697 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 LIMD1Q9UGP4 676 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 IRF6O14896 467 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 GRIK5Q16478 980 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 BMT2Q1RMZ1 405 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 SYT12Q8IV01 421 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 USP6NLQ92738 828 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ACTL7BQ9Y614 415 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ABHD2P08910 425 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CD86P42081 329 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CLCN5P51795 746 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 NOMO2Q5JPE7 1267 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 ZCCHC23Q6ZST2 131 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 CENPTQ96BT3 561 aa13.8□□□□□ -0.2
LAMB1-201ENST00000222399 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms