RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 OR1G1P47890 313 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 CORO6Q6QEF8 472 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 KBTBD2Q8IY47 623 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 BBS5Q8N3I7 341 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 RBM15BQ8NDT2 890 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 TFB1MQ8WVM0 346 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 TFAP2BQ92481 460 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 OXNAD1Q96HP4 312 aaPredicted RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 FIZ1Q96SL8 496 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 NIFKQ9BYG3 293 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 COQ4Q9Y3A0 265 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 MYOCOSA0A1B0GUC4 107 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 TMEM191CA6NGB0 347 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 KPNA7A9QM74 516 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 COL6A2P12110 1019 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 RBL1P28749 1068 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 HMOX2P30519 316 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 UBAP2LQ14157 1087 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 PDK1Q15118 436 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 SIGIRRQ6IA17 410 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 TMEM192Q8IY95 271 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 SH3KBP1Q96B97 665 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 TRIM56Q9BRZ2 755 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 HERPUD2Q9BSE4 406 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 TMEM109Q9BVC6 243 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 SERHL2Q9H4I8 314 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 SLC38A7Q9NVC3 462 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 ABI2Q9NYB9 513 aaPredicted RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 UBP1Q9NZI7 540 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 IPO11Q9UI26 975 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 GRID1Q9ULK0 1009 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 PPM1HQ9ULR3 514 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 SHOC2Q9UQ13 582 aa10.77□□□□□ -0.69
VPS18-201ENST00000220509 APOBEC2Q9Y235 224 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 HBS1LQ9Y450 684 aaKnown RBP10.77□□□□□ -0.69
VPS18-201ENST00000220509 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 ZBTB11O95625 1053 aaPredicted RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 PMLP29590 882 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 GJA5P36382 358 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 BST2Q10589 180 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 MFSD10Q14728 455 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 MYLK3Q32MK0 819 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 ITPRIPL1Q6GPH6 555 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 RBM44Q6ZP01 1051 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 C1orf127Q8N9H9 656 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 HAUS8Q9BT25 410 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 KBTBD13C9JR72 458 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 FAM47E-STBD1D6RA91 191 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 C2CD2LO14523 706 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 THP07101 528 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 MX2P20592 715 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 RGS2P41220 211 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 TKTL1P51854 596 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 IST1P53990 364 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 GAD2Q05329 585 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 PDK2Q15119 407 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 FAM183BPQ6ZVS7 135 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 ALKBH8Q96BT7 664 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 GAD1Q99259 594 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 B3GNT5Q9BYG0 378 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 GOLGA2P5Q9HBQ8 144 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 DDX43Q9NXZ2 648 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 GMIPQ9P107 970 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 PFDN2Q9UHV9 154 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 MTO1Q9Y2Z2 717 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 BRCA2P51587 3418 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 VNN1O95497 513 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 CLPTM1O96005 669 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 ICAM3P32942 547 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 CXCL17Q6UXB2 119 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 MON1BQ7L1V2 547 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 SLC38A6Q8IZM9 456 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 DEFB106AQ8N104 65 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 IPMKQ8NFU5 416 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 GDPD5Q8WTR4 605 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 HERVK_113Q902F9 699 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 KLHL4Q9C0H6 718 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 WDCPQ9H6R7 721 aa10.76□□□□□ -0.69
VPS18-201ENST00000220509 STX18Q9P2W9 335 aaKnown RBP10.76□□□□□ -0.69
VPS18-201ENST00000220509 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 HAT1O14929 419 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 TADA2AO75478 443 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 SERPINB7O75635 380 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 TCEA1P23193 301 aaKnown RBP10.75□□□□□ -0.69
VPS18-201ENST00000220509 SOX11P35716 441 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 TPD52P55327 224 aaPredicted RBP10.75□□□□□ -0.69
VPS18-201ENST00000220509 CDK16Q00536 496 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 RELAQ04206 551 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 PLEKHA7Q6IQ23 1121 aa10.75□□□□□ -0.69
VPS18-201ENST00000220509 ZC3H3Q8IXZ2 948 aaKnown RBP10.75□□□□□ -0.69
VPS18-201ENST00000220509 NELL1Q92832 810 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms