RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 M0QX08 132 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ALDH18A1P54886 795 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PTP4A2Q12974 167 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PTK6Q13882 451 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 MXD4Q14582 209 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PLPPR4Q7Z2D5 763 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 CHERPQ8IWX8 916 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ELMOD2Q8IZ81 293 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 TRIM56Q9BRZ2 755 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 AP4S1Q9Y587 144 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 CCRL2O00421 344 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 OGTO15294 1046 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PROSCO94903 275 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 GJB1P08034 283 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PHC1P78364 1004 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 GRM1Q13255 1194 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PPIL2Q13356 520 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ADGRE1Q14246 886 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 AARS2Q5JTZ9 985 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 CYP4A22Q5TCH4 519 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ZBTB8OSQ8IWT0 167 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF420Q8TAQ5 688 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 PGBD4Q96DM1 585 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 RMND5BQ96G75 393 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 VPS35Q96QK1 796 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 MMP19Q99542 508 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 WWP1Q9H0M0 922 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 SMARCAD1Q9H4L7 1026 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 WDR6Q9NNW5 1121 aaKnown RBP13.89□□□□□ -0.19
GABPB1-201ENST00000220429 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 KCNN3Q9UGI6 736 aa13.89□□□□□ -0.19
GABPB1-201ENST00000220429 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 HOXC11O43248 304 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 MSI1O43347 362 aaKnown RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 MYL6P60660 151 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 MAMLD1Q13495 774 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 KCTD2Q14681 263 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 HSF5Q4G112 596 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 LIN9Q5TKA1 542 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 SYDE1Q6ZW31 735 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 ZBTB46Q86UZ6 589 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 HPS6Q86YV9 775 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 HM13Q8TCT9 377 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 VCPIP1Q96JH7 1222 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 DOK1Q99704 481 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 CIB1Q99828 191 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 FRMD8Q9BZ67 464 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 CPSF3Q9UKF6 684 aaKnown RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 APOBEC2Q9Y235 224 aaKnown RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 H7C0C1 242 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 B3GALNT1O75752 331 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 IL1BP01584 269 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 CDH15P55291 814 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 STILQ15468 1287 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 PPP4R4Q6NUP7 873 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 RMDN1Q96DB5 314 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 RUBCNLQ9H714 662 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 PSMC3IPQ9P2W1 217 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-201ENST00000220429 HMGXB4Q9UGU5 601 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 DSEQ9UL01 958 aa13.88□□□□□ -0.19
GABPB1-201ENST00000220429 LINC00854A0A1B0GVQ3 168 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 FAM172BPA6NC97 362 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 E5RJQ4 531 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 TAF4O00268 1085 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 SLC22A1O15245 554 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 BGNP21810 368 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PROZP22891 400 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 TAS2R40P59535 323 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 SPARTQ8N0X7 666 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 ATG4AQ8WYN0 398 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 C1orf50Q9BV19 199 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 CXorf21Q9HAI6 301 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PTPRHQ9HD43 1115 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PDGFCQ9NRA1 345 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 COMMD8Q9NX08 183 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 GDAP2Q9NXN4 497 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PLXNA1Q9UIW2 1896 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 SNAP91O60641 907 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PROCP04070 461 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 HOXC6P09630 235 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms