RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 TBC1D3HP0C7X1 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 SRCP12931 536 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 ZNF18P17022 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CHRNB2P17787 502 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 RRM1P23921 792 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CDH4P55283 916 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CNTN1Q12860 1018 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 SHBQ15464 509 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CCDC157Q569K6 752 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CDKAL1Q5VV42 579 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3GQ6DHY5 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3CQ6IPX1 549 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 FAM131BQ86XD5 332 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 ZDHHC17Q8IUH5 632 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 TBC1D3Q8IZP1 549 aaPredicted RBP22.72■■□□□ 1.23
VTI1B-201ENST00000216456 SH2D3CQ8N5H7 860 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 SPAG5Q96R06 1193 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CAAP1Q9H8G2 361 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 NLRC4Q9NPP4 1024 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 FAM207AQ9NSI2 230 aaPredicted RBP22.72■■□□□ 1.23
VTI1B-201ENST00000216456 VPS51Q9UID3 782 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 STAP1Q9ULZ2 295 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 CA5BQ9Y2D0 317 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 PCDHGB2Q9Y5G2 931 aa22.72■■□□□ 1.23
VTI1B-201ENST00000216456 A0A1W2PR77 199 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 CBX4O00257 560 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 TAF4O00268 1085 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 VILLO15195 856 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 FLRT2O43155 660 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 SRGAP2O75044 1071 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 RHOCP08134 193 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 EEF1GP26641 437 aaKnown RBP22.71■■□□□ 1.23
VTI1B-201ENST00000216456 C21orf59P57076 290 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 SNX16P57768 344 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 SLC25A52Q3SY17 297 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 BRMS1LQ5PSV4 323 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 GLRX5Q86SX6 157 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 OR7D4Q8NG98 312 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 SLC30A5Q8TAD4 765 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 ENOX1Q8TC92 643 aaKnown RBP22.71■■□□□ 1.23
VTI1B-201ENST00000216456 OR8D1Q8WZ84 308 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 SERAC1Q96JX3 654 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 ACE2Q9BYF1 805 aaPredicted RBP22.71■■□□□ 1.23
VTI1B-201ENST00000216456 METTL5Q9NRN9 209 aaKnown RBP22.71■■□□□ 1.23
VTI1B-201ENST00000216456 FANCLQ9NW38 375 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 PPM1HQ9ULR3 514 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 ACTL7AQ9Y615 435 aa22.71■■□□□ 1.23
VTI1B-201ENST00000216456 FAM221BA6H8Z2 402 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 SRRM3A6NNA2 597 aaPredicted RBP22.7■■□□□ 1.22
VTI1B-201ENST00000216456 DRGXA6NNA5 263 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 ENDOD1O94919 500 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 CCT8P50990 548 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 CCR5P51681 352 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 POLR2FP61218 127 aaKnown RBP22.7■■□□□ 1.22
VTI1B-201ENST00000216456 ATP11AP98196 1134 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 FMO1Q01740 532 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 AGBL4Q5VU57 503 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 BNIPLQ7Z465 357 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 CHST14Q8NCH0 376 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 PIP4K2CQ8TBX8 421 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 PGAP3Q96FM1 320 aaPredicted RBP22.7■■□□□ 1.22
VTI1B-201ENST00000216456 ARHGAP20Q9P2F6 1191 aa22.7■■□□□ 1.22
VTI1B-201ENST00000216456 A0A1B0GTQ1 180 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 E9PAM4 449 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 CD38P28907 300 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 RDXP35241 583 aaKnown RBP22.69■■□□□ 1.22
VTI1B-201ENST00000216456 OXCT1P55809 520 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 TAS2R38P59533 333 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 C15orf59Q2T9L4 293 aaPredicted RBP22.69■■□□□ 1.22
VTI1B-201ENST00000216456 CLEC17AQ6ZS10 378 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 JOSD2Q8TAC2 188 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 KLK6Q92876 244 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 FAM131CQ96AQ9 280 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 PCDHB18PQ96TA0 734 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 TNKS2Q9H2K2 1166 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 RRN3Q9NYV6 651 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 ZNF212Q9UDV6 495 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 APOBEC2Q9Y235 224 aaKnown RBP22.69■■□□□ 1.22
VTI1B-201ENST00000216456 PLXNB3Q9ULL4 1909 aa22.69■■□□□ 1.22
VTI1B-201ENST00000216456 MCF2LO15068 1137 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 LSM8O95777 96 aaKnown RBP22.68■■□□□ 1.22
VTI1B-201ENST00000216456 CAPNS1P04632 268 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 SCNN1AP37088 669 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 CLDN6P56747 220 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 JAM2P57087 298 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 SCAPQ12770 1279 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 SFSWAPQ12872 951 aaKnown RBP22.68■■□□□ 1.22
VTI1B-201ENST00000216456 CDO1Q16878 200 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 LRSAM1Q6UWE0 723 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 ATP11CQ8NB49 1132 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 ARRDC3Q96B67 414 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 MYOCQ99972 504 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 C11orf70Q9BRQ4 267 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 SIK3Q9Y2K2 1263 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 DOCK9Q9BZ29 2069 aa22.68■■□□□ 1.22
VTI1B-201ENST00000216456 TP53BP1Q12888 1972 aaPredicted RBP22.68■■□□□ 1.22
VTI1B-201ENST00000216456 IGLV3-10A0A075B6K4 115 aa22.67■■□□□ 1.22
VTI1B-201ENST00000216456 FAM149AA5PLN7 773 aa22.67■■□□□ 1.22
VTI1B-201ENST00000216456 LATO43561 262 aa22.67■■□□□ 1.22
VTI1B-201ENST00000216456 PLRG1O43660 514 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms