RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 CLTCQ00610 1675 aaKnown RBP13.77□□□□□ -0.2
SF3A1-201ENST00000215793 A0A087WXM4 84 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 BTNL10A8MVZ5 291 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 FAM25AB3EWG3 89 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 FAM25CB3EWG5 89 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 FAM25GB3EWG6 89 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 HS6ST1O60243 411 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 USP12O75317 370 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 PAX3P23760 479 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 PLK1P53350 603 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 DRG2P55039 364 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 CRY1Q16526 586 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 RNF148Q8N7C7 305 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 EPB41L4BQ9H329 900 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 ARL15Q9NXU5 204 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 SMIM31A0A1B0GVY4 71 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 H3BN98 237 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 FMO4P31512 558 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 MAPK8P45983 427 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 TSNQ15631 228 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 USP45Q70EL2 814 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 FAM71AQ8IYT1 594 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 GAD1Q99259 594 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 NRCAMQ92823 1304 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 A0A088AWK7 358 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 ABHD2P08910 425 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 LTA4HP09960 611 aaKnown RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 MYL12AP19105 171 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF10P21506 573 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 HOXA10P31260 410 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 RSBN1Q5VWQ0 802 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-201ENST00000215793 IRGCQ6NXR0 463 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 CYP2R1Q6VVX0 501 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 SYT12Q8IV01 421 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 DIABLOQ9NR28 239 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 TMCO1Q9UM00 188 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 C15orf41Q9Y2V0 281 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 SESN1Q9Y6P5 492 aa13.77□□□□□ -0.21
SF3A1-201ENST00000215793 CYP3A7-CYP3A51PA0A087WV96 503 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 MEI4A8MW99 385 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 GJB6O95452 261 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 NPR3P17342 541 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 CYP3A7P24462 503 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ACOX1Q15067 660 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 MACC1Q6ZN28 852 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 PROX1Q92786 737 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 SEMA4DQ92854 862 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 C1QTNF7Q9BXJ2 289 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZMYND8Q9ULU4 1186 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 FEN1P39748 380 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 INTS11Q5TA45 600 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF621Q6ZSS3 439 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 SPG21Q9NZD8 308 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 INVSQ9Y283 1065 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 CRYL1Q9Y2S2 319 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 PIPSLA2A3N6 862 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 KPNA3O00505 521 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 SNUPNO95149 360 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 PARNO95453 639 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ANXA5P08758 320 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 TSEN2Q8NCE0 465 aaKnown RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF398Q8TD17 642 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 KAT5Q92993 513 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 C18orf25Q96B23 403 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 TPD52L3Q96J77 140 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF184Q99676 751 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 TMEM216Q9P0N5 145 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 PRKAG3Q9UGI9 489 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 A0A0B4J269 797 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-201ENST00000215793 EPN2O95208 641 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 NAGLUP54802 743 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 TRIQKQ629K1 86 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 DEFB132Q7Z7B7 95 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 RIOX2Q8IUF8 465 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 GPC2Q8N158 579 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 SHC3Q92529 594 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
SF3A1-201ENST00000215793 DIP2BQ9P265 1576 aa13.75□□□□□ -0.21
SF3A1-201ENST00000215793 SF3B1O75533 1304 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■■■ 53.5
SF3A1-201ENST00000215793 H0YC42 278 aa13.75□□□□□ -0.21
SF3A1-201ENST00000215793 TPP1O14773 563 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms