RNA–Protein interactions for RNA: ENST00000194155.6

PCDHB2-201, Transcript of protocadherin beta 2, humanhuman

APPRIS P1 BASIC

Gene PCDHB2, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-201ENST00000194155 CLCNKBP51801 687 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 GAD2Q05329 585 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PDK1Q15118 436 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 DDR2Q16832 855 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 SLC10A6Q3KNW5 377 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 DENND1BQ6P3S1 775 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PATL1Q86TB9 770 aaKnown RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 C1orf127Q8N9H9 656 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 ATP6V1E2Q96A05 226 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 ARHGAP26Q9UNA1 814 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 TRAFD1O14545 582 aaPredicted RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 LTFP02788 710 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PSMC3P17980 439 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PPARGP37231 505 aaPredicted RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 DUSP4Q13115 394 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 C12orf56Q8IXR9 622 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 DENND1AQ8TEH3 1009 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 MAGEB5Q9BZ81 275 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PCDH9Q9HC56 1237 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PAK5Q9P286 719 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 ADAMTS5Q9UNA0 930 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 AP4E1Q9UPM8 1137 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
PCDHB2-201ENST00000194155 PRR23AA6NEV1 266 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 NPR3P17342 541 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 PAMP19021 973 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 NFIL3Q16649 462 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TFAP2DQ7Z6R9 452 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 SHC3Q92529 594 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 APBB2Q92870 758 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 SH3GLB1Q9Y371 365 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TSPAN3O60637 253 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 IVDP26440 423 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 KRT33BQ14525 404 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 ACSS3Q9H6R3 686 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 EEF1DP29692 281 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 HADHBP55084 474 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 PKNOX1P55347 436 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TBX4P57082 545 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 NADK2Q4G0N4 442 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 FASTKD1Q53R41 847 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 GPR88Q9GZN0 384 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TLE6Q9H808 572 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 LIN28AQ9H9Z2 209 aaKnown RBP13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 AURKCQ9UQB9 309 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TELO2Q9Y4R8 837 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 AP4B1Q9Y6B7 739 aa13.19□□□□□ -0.3
PCDHB2-201ENST00000194155 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 GNGT2O14610 69 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 AVILO75366 819 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 SPAG6O75602 509 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 LAG3P18627 525 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 EDNRBP24530 442 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 CMPK2Q5EBM0 449 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 FNBP1LQ5T0N5 605 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 SDE2Q6IQ49 451 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 CLVS1Q8IUQ0 354 aaPredicted RBP13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 JADE3Q92613 823 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 EBF4Q9BQW3 602 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 VPS28Q9UK41 221 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 ANGPTL3Q9Y5C1 460 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 PMPCBO75439 489 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 TRMUO75648 421 aaKnown RBP13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 CNMDO75829 334 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 HDCP19113 662 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 SOX11P35716 441 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 MAPK10P53779 464 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 NAA20P61599 178 aa13.18□□□□□ -0.3
PCDHB2-201ENST00000194155 MPP3Q13368 585 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms