RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 CLSTN2Q9H4D0 955 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
ERCC1-201ENST00000013807 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.31■□□□□ 0.2
ERCC1-201ENST00000013807 SLC25A13Q9UJS0 675 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 SARDHQ9UL12 918 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 STAP1Q9ULZ2 295 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
ERCC1-201ENST00000013807 FASNP49327 2511 aaKnown RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 SYNJ2BP-COX16A0A087WUM0 186 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 E9PAM4 449 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TLR4O00206 839 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 ADCY5O95622 1261 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 C1SP09871 688 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 CYP11B1P15538 503 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 NXPH1P58417 271 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 SLC25A52Q3SY17 297 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 SLC45A4Q5BKX6 768 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 AGBL4Q5VU57 503 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 PRPF39Q86UA1 669 aaKnown RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 OXR1Q8N573 874 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 C18orf8Q96DM3 657 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 SERAC1Q96JX3 654 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 TKTL2Q9H0I9 626 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 ANLNQ9NQW6 1124 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 GDF3Q9NR23 364 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 COX16Q9P0S2 106 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 RALYQ9UKM9 306 aaKnown RBP16.3■□□□□ 0.2
ERCC1-201ENST00000013807 GPSM3Q9Y4H4 160 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
ERCC1-201ENST00000013807 BAHCC1Q9P281 2608 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 CXorf51AA0A1B0GTR3 108 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 LSM8O95777 96 aaKnown RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PNMA6AP0CW24 399 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 ARRB1P49407 418 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 CLCN6P51797 869 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 METAP1P53582 386 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PPP2CBP62714 309 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PPP2CAP67775 309 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 KRT83P78385 493 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 ALFQ53S48 1182 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 NEK5Q6P3R8 708 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 KANSL1Q7Z3B3 1105 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 TMPRSS12Q86WS5 348 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 TMIEQ8NEW7 156 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PIP4K2CQ8TBX8 421 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 TSC1Q92574 1164 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PSMB7Q99436 277 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 C2orf49Q9BVC5 232 aaPredicted RBP16.29■□□□□ 0.2
ERCC1-201ENST00000013807 SYNCQ9H7C4 482 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 PREBQ9HCU5 417 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 AASDHPPTQ9NRN7 309 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 CHMP5Q9NZZ3 219 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 ZNF212Q9UDV6 495 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 FTSJ1Q9UET6 329 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 TMEM59LQ9UK28 342 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 VPS28Q9UK41 221 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 ASXL3Q9C0F0 2248 aa16.29■□□□□ 0.2
ERCC1-201ENST00000013807 C1QTNF3-AMACRE9PGA6 284 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 MAGEC1O60732 1142 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 RTN2O75298 545 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 CNTN5O94779 1100 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 ENDOD1O94919 500 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 SRCP12931 536 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 UCHL3P15374 230 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 TFE3P19532 575 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-201ENST00000013807 EPHA8P29322 1005 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-201ENST00000013807 TAS2R38P59533 333 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 CNTN1Q12860 1018 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 ACCSLQ4AC99 568 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 ZNF783Q6ZMS7 281 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 ERICH1Q86X53 443 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 XYLT1Q86Y38 959 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 SIK2Q9H0K1 926 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 PLCB1Q9NQ66 1216 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 DACH1Q9UI36 760 aa16.28■□□□□ 0.2
ERCC1-201ENST00000013807 MT-CO1P00395 513 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 IL9RQ01113 521 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 DEUP1Q05D60 604 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms