RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Dync1li1Q8R1Q8 523 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Olfr615Q8VGY4 313 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ppp1r16bQ8VHQ3 568 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Taf11Q99JX1 211 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ndufa10Q99LC3 355 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rprd1bQ9CSU0 326 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Med10Q9CXU0 135 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 NarfQ9CYQ7 462 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 AenQ9CZI9 336 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 MceeQ9D1I5 178 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Atp5dQ9D3D9 168 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pgam1Q9DBJ1 254 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Tagln2Q9WVA4 199 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Arih2Q9Z1K6 492 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Adgra2Q91ZV8 1336 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zmynd8A2A484 1235 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Slc4a11A2AJN7 862 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ttll8A4Q9F1 832 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ttc7bE9Q6P5 843 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Spin2fJ3QPU0 254 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gjd2O54851 321 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Apba3O88888 571 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 H2-Eb1P04230 264 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Il2P04351 169 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 MutP16332 748 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Hnf1bP27889 558 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Atp6v0d1P51863 351 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kpnb1P70168 876 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Mtf2Q02395 593 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zbtb14Q08376 449 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Slc17a7Q3TXX4 560 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sec31bQ3TZ89 1158 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 6430531B16RikQ3V2J1 307 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zfp658Q5PPQ4 887 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 CfiQ61129 603 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Xpo1Q6P5F9 1071 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Chst10Q6PGK7 356 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cacna2d2Q6PHS9 1154 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rpp38Q80UU2 280 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pdk1Q8BFP9 434 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pcmtd2Q8BHD8 359 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 UnkQ8BL48 810 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Apol7cQ8C6E1 369 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Strip2Q8C9H6 844 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pgm2l1Q8CAA7 621 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Tasp1Q8R1G1 420 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Uroc1Q8VC12 676 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Mtmr14Q8VEL2 648 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 IrgqQ8VIM9 583 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Usp3Q91W36 520 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Eva1aQ91WM6 156 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 As3mtQ91WU5 376 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pomgnt1Q91X88 660 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Brinp1Q920P3 760 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gps1Q99LD4 471 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ptdss1Q99LH2 473 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Q9CPS8 106 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 1700129C05RikQ9CQ77 218 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Micu3Q9CTY5 523 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Serbp1Q9CY58 407 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Nt5c3aQ9D020 331 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Fam3aQ9D8T0 230 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Actrt2Q9D9L5 377 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rsph3bQ9DA80 389 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Slc13a1Q9JHI4 594 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Caln1Q9JJG7 219 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Atp6v0a1Q9Z1G4 839 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Supt3B0QZW4 406 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kbtbd2G3X9X1 623 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kpna6O35345 536 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 DffaO54786 331 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Per3O70361 1113 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cyp4a10O88833 509 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zfy2P20662 777 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rbp3P49194 1234 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sesn2P58043 480 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rab6bP61294 208 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 YwhagP61982 247 aaKnown RBP6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Serpinb5P70124 375 aaKnown RBP6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Art5P70352 309 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Itga4Q00651 1039 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 RnaselQ05921 735 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gdf3Q07104 366 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 4933415F23RikQ14BX6 153 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Trim71Q1PSW8 855 aaKnown RBP6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Meaf6Q2VPQ9 191 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 HgsnatQ3UDW8 656 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kif26aQ52KG5 1881 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cage1Q5IR70 849 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Brsk1Q5RJI5 778 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 P4ha2Q60716 537 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 PostnQ62009 838 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Utf1Q6J1H4 339 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 PapolgQ6PCL9 739 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Fam107aQ78TU8 144 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Lrfn2Q80TG9 788 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Clic5Q8BXK9 251 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Bag5Q8CI32 447 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 BphlQ8R164 291 aa6.38□□□□□ -1.39
Lig4-202ENSMUST00000170033 Slc25a3Q8VEM8 357 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms