RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Acad9Q8JZN5 625 aaKnown RBP16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 TfQ921I1 697 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2abC0HKE1 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2acC0HKE2 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2adC0HKE3 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2aeC0HKE4 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2agC0HKE5 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2aiC0HKE6 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2anC0HKE7 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2aoC0HKE8 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2apC0HKE9 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hsd17b1P51656 344 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 NfycP70353 335 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Lrrc47Q505F5 581 aaKnown RBP16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Zswim9Q6DI92 447 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist3h2aQ8BFU2 130 aaKnown RBP16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2afQ8CGP5 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2ahQ8CGP6 128 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2akQ8CGP7 130 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 H2afjQ8R1M2 129 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Trpm5Q9JJH7 1158 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm7275E9Q1B3 247 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 PfklP12382 780 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Stt3bQ3TDQ1 823 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mrgprx2Q3UG50 352 aa16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mrps35Q8BJZ4 320 aaKnown RBP16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 NkrfQ8BY02 690 aaKnown RBP16.83■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Unc5cO08747 931 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 PvalbP32848 110 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 LtbrP50284 415 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 RubcnlQ3TD16 648 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ugt2a1Q80X89 528 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ak8Q32M07 479 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mars2Q499X9 586 aaKnown RBP16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Lcp2Q60787 533 aaKnown RBP16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2c29Q64458 490 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 LnpepQ8C129 1025 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Smco1Q8CEZ1 214 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ubqln1Q8R317 582 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Arhgef25Q9CWR0 618 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 MymkQ9D1N4 221 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Git2Q9JLQ2 708 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tob2Q9JM55 345 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Efcab12V9GXH0 673 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 A0A1L1ST33 502 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm5134E9QAB5 671 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mmp13P33435 472 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gdf10P97737 476 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Glt6d1Q2NKH9 311 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pik3r3Q64143 461 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ddhd1Q80YA3 547 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rnf128Q9D304 428 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 UqcrbQ9D855 111 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tlr5Q9JLF7 859 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Copg2Q9QXK3 871 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Esp31A8R0W3 114 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm7945F6QI24 236 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rnf145Q5SWK7 663 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mon1aQ6PDG8 556 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 EtnpplQ8BWU8 499 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Dact1Q8R4A3 778 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pwp1Q99LL5 501 aaKnown RBP16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Actrt1Q9D9J3 376 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Kidins220E9Q9B7 1793 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Smok3aC0HKC8 504 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Smok3bC0HKC9 504 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 DcxO88809 366 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ap5z1Q3U829 807 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Slc39a14Q75N73 489 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ago4Q8CJF8 861 aa16.83■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Magea10A2AMW4 325 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 AV320801A2AWL3 467 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm15023L7MUB4 467 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Clec12aQ504P2 267 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Snap47Q8R570 413 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rabl3Q9D4V7 236 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 SpastQ9QYY8 614 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cd97Q9Z0M6 818 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Net1Q9Z206 595 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ankrd12G5E893 2041 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Nos2P29477 1144 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Slc2a3P32037 493 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ugt3a1Q3UP75 523 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pik3r5Q5SW28 871 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pbld2Q9CXN7 288 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ccdc120A2AEV7 629 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyb5d1Q5NCY3 228 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Dpysl3Q62188 570 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Efcab7Q8VDY4 628 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Trub2Q91WG3 331 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Kpna4O35343 521 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mybpc3O70468 1270 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Serpina3cP29621 417 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 PostnQ62009 838 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 2610042L04RikQ9D073 150 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ugt1a8D3Z748 530 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ugt1a10E9PXN7 530 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Aldh16a1Q571I9 802 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Znf496Q5SXI5 585 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olfr295Q7TS08 309 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms