RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 TEX264Q9Y6I9 313 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 MTCL1Q9Y4B5 1905 aaKnown RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 SMIM23A6NLE4 172 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 RASA4BC9J798 803 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 RASA4O43374 803 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ELK3P41970 407 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 SLCO1A2P46721 670 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 GPX6P59796 221 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 IFI35P80217 286 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 SMAD3P84022 425 aaKnown RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ZXDBP98169 803 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CDK16Q00536 496 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CAPN12Q6ZSI9 719 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ADAMTS19Q8TE59 1207 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ZNF419Q96HQ0 510 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ROPN1BQ9BZX4 212 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 GBA3Q9H227 469 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ATXN3LQ9H3M9 355 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 VPS37BQ9H9H4 285 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ROPN1Q9HAT0 212 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MAN1C1Q9NR34 630 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 BCCIPQ9P287 314 aaKnown RBP eCLIP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ZFP37Q9Y6Q3 630 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 GBF1Q92538 1859 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 A0A087WUV0 522 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 A0A1W2PRU2 124 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 TRDMT1O14717 391 aaKnown RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 RASGRF2O14827 1237 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CLASP2O75122 1294 aaKnown RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 RFPL2O75678 378 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MYL4P12829 197 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 GJA1P17302 382 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 NFKB1P19838 968 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 OR1E1P30953 314 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MAGEA3P43357 314 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MAPKAPK2P49137 400 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 LONRF1Q17RB8 773 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CCDC38Q502W7 563 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ITPRIPL1Q6GPH6 555 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 TIGD7Q6NT04 549 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MAB21L3Q8N8X9 362 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 PRICKLE1Q96MT3 831 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 IL12RB2Q99665 862 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 ASAH2Q9NR71 780 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CHMP2BQ9UQN3 213 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 YBX2Q9Y2T7 364 aaKnown RBP18.65■□□□□ 0.58
PHGDH-209ENST00000641074 CPQQ9Y646 472 aa18.65■□□□□ 0.58
PHGDH-209ENST00000641074 MYO7AQ13402 2215 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 RANBP2P49792 3224 aaKnown RBP18.64■□□□□ 0.57
PHGDH-209ENST00000641074 ARHGAP42A6NI28 874 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 HMGB1P1B2RPK0 211 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-209ENST00000641074 RAMP2O60895 175 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 EPCAMP16422 314 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 CDC25CP30307 473 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 SSTR1P30872 391 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 ERVK-21P61565 698 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 RPS24P62847 133 aaKnown RBP18.64■□□□□ 0.57
PHGDH-209ENST00000641074 RABGAP1LQ5R372 815 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 C6orf118Q5T5N4 469 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 AGBL2Q5U5Z8 902 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 CROCCP2Q86T23 111 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 PALM2Q8IXS6 379 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 ATP11CQ8NB49 1132 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 SAMD11Q96NU1 681 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 XAB2Q9HCS7 855 aaKnown RBP18.64■□□□□ 0.57
PHGDH-209ENST00000641074 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 DENND4CQ5VZ89 1909 aa18.64■□□□□ 0.57
PHGDH-209ENST00000641074 H3BNC9 293 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 GREM1O60565 184 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 TCEA3O75764 348 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PEX11BO96011 259 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PBX2P40425 430 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 SGSHP51688 502 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 SARNPP82979 210 aaKnown RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 GPM6BQ13491 265 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 STAT4Q14765 748 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 POLD3Q15054 466 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 SKIDA1Q1XH10 827 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PARP15Q460N3 678 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 STXBP5Q5T5C0 1151 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 C3orf62Q6ZUJ4 267 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 RTL10Q7L3V2 364 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 MAML1Q92585 1016 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PGM2Q96G03 612 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PKNOX2Q96KN3 472 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 GCNAQ96QF7 691 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 STOML2Q9UJZ1 356 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 J3KR12 359 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 SCAMP3O14828 347 aaKnown RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 PER2O15055 1255 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 C1RP00736 705 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 CKMP06732 381 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 CCR2P41597 374 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 CDH4P55283 916 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 YBEYP58557 167 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 SPARCL1Q14515 664 aa18.63■□□□□ 0.57
PHGDH-209ENST00000641074 DNAJC21Q5F1R6 531 aaKnown RBP18.63■□□□□ 0.57
PHGDH-209ENST00000641074 LRRC8BQ6P9F7 803 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms