RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 C5AR1P21730 350 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 NSFP46459 744 aaKnown RBP25.9■■□□□ 1.74
VEGFA-232ENST00000640653 AFF3P51826 1226 aaKnown RBP25.9■■□□□ 1.74
VEGFA-232ENST00000640653 KRT83P78385 493 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 ACCSLQ4AC99 568 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 ANO6Q4KMQ2 910 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 ALFQ53S48 1182 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 APTXQ7Z2E3 356 aaKnown RBP25.9■■□□□ 1.74
VEGFA-232ENST00000640653 SETD3Q86TU7 594 aaPredicted RBP25.9■■□□□ 1.74
VEGFA-232ENST00000640653 EMC1Q8N766 993 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 FRS2Q8WU20 508 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 CNTNAP3BQ96NU0 1288 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 CNTNAP3Q9BZ76 1288 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 ADAMTS1Q9UHI8 967 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 SNX10Q9Y5X0 201 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 E9PAM4 449 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 ATP9BO43861 1147 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 IL1BP01584 269 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 UNGP13051 313 aaPredicted RBP25.89■■□□□ 1.74
VEGFA-232ENST00000640653 CD27P26842 260 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 ATP11AP98196 1134 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 TEAD4Q15561 434 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 KIAA0895LQ68EN5 471 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 DSG4Q86SJ6 1040 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 FAM131BQ86XD5 332 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 BPIFA3Q9BQP9 254 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 C2orf49Q9BVC5 232 aaPredicted RBP25.89■■□□□ 1.74
VEGFA-232ENST00000640653 NEUROG2Q9H2A3 272 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 OSGEPQ9NPF4 335 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 SERGEFQ9UGK8 458 aa25.89■■□□□ 1.74
VEGFA-232ENST00000640653 SPTBN2O15020 2390 aa25.89■■□□□ 1.73
VEGFA-232ENST00000640653 IGLV3-10A0A075B6K4 115 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 FAM47DPA6NHR8 397 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 LRRC72A6NJI9 287 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 SMTNL1A8MU46 457 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 GJB3O75712 270 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 ENDOD1O94919 500 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 CER1O95813 267 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 ATP1A3P13637 1013 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 GOT1P17174 413 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 SDC4P31431 198 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 SHC2P98077 582 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 CLEC16AQ2KHT3 1053 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 C6orf118Q5T5N4 469 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 RXFP2Q8WXD0 754 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 OR8D1Q8WZ84 308 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 PCDHB18PQ96TA0 734 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 TM9SF3Q9HD45 589 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 TMPRSS4Q9NRS4 437 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 SEPT11Q9NVA2 429 aaKnown RBP25.88■■□□□ 1.73
VEGFA-232ENST00000640653 ADAM22Q9P0K1 906 aa25.88■■□□□ 1.73
VEGFA-232ENST00000640653 SRGAP2O75044 1071 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 CALB1P05937 261 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 CCDC172P0C7W6 258 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 CD59P13987 128 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 VAV1P15498 845 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 GALCP54803 685 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 GSCP56915 257 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-232ENST00000640653 HNRNPDQ14103 355 aaKnown RBP25.87■■□□□ 1.73
VEGFA-232ENST00000640653 DLG2Q15700 870 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 CDO1Q16878 200 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 ARL13BQ3SXY8 428 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 TFAP2DQ7Z6R9 452 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 PHLDB2Q86SQ0 1253 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 SH2D3CQ8N5H7 860 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 OR2T34Q8NGX1 318 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 MPP6Q9NZW5 540 aa25.87■■□□□ 1.73
VEGFA-232ENST00000640653 OR1E1P30953 314 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 GRIA4P48058 902 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 CSNK1EP49674 416 aaKnown RBP25.86■■□□□ 1.73
VEGFA-232ENST00000640653 PTP4A2Q12974 167 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 FAM46CQ5VWP2 391 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 CAVIN1Q6NZI2 390 aaKnown RBP25.86■■□□□ 1.73
VEGFA-232ENST00000640653 NCEH1Q6PIU2 408 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 PHF13Q86YI8 300 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-232ENST00000640653 AADATQ8N5Z0 425 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 ZYG11BQ9C0D3 744 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 GAREM1Q9H706 876 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 HS3ST2Q9Y278 367 aa25.86■■□□□ 1.73
VEGFA-232ENST00000640653 A0A1B0GVT2 93 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 C2CD4BA6NLJ0 364 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 ALOX15BO15296 676 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 IGHV4-34P06331 123 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 KRT3P12035 628 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 PTPN9P43378 593 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 BNC1Q01954 994 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 C15orf59Q2T9L4 293 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-232ENST00000640653 CCDC14Q49A88 953 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 STRADAQ7RTN6 431 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 DCAF4L2Q8NA75 395 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 OR14C36Q8NHC7 312 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 JOSD2Q8TAC2 188 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 CCDC114Q96M63 670 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 PSMB7Q99436 277 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 AGPAT1Q99943 283 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 SELENOOQ9BVL4 669 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 PPARGC1AQ9UBK2 798 aaKnown RBP25.85■■□□□ 1.73
VEGFA-232ENST00000640653 VPS51Q9UID3 782 aa25.85■■□□□ 1.73
VEGFA-232ENST00000640653 TPX2Q9ULW0 747 aaKnown RBP25.85■■□□□ 1.73
VEGFA-232ENST00000640653 SLCO1B1Q9Y6L6 691 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms