RNA–Protein interactions for RNA: ENST00000640410.1

SETD1A-203, Transcript of SET domain containing 1A, humanhuman

TSL 3

Gene SETD1A, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-203ENST00000640410 ST3GAL2Q16842 350 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 C9orf64Q5T6V5 341 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 FBXL22Q6P050 247 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 BAP1Q92560 729 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 RNF34Q969K3 372 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 IGSF8Q969P0 613 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 CCDC42Q96M95 316 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 ADAM33Q9BZ11 813 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 ZDHHC5Q9C0B5 715 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
SETD1A-203ENST00000640410 SERGEFQ9UGK8 458 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 SLCO3A1Q9UIG8 710 aa16.81■□□□□ 0.28
SETD1A-203ENST00000640410 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.81■□□□□ 0.28
SETD1A-203ENST00000640410 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 SSU72P8A0A1W2PR75 194 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 CYP11B1P15538 503 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 ABCB4P21439 1286 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 MZF1P28698 734 aaPredicted RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 CDH5P33151 784 aaPredicted RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 NOS2P35228 1153 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 STK19P49842 368 aaPredicted RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 BPIFB4P59827 614 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 ECT2LQ008S8 904 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 RABGAP1LQ5R372 815 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 TAF3Q5VWG9 929 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 CXorf57Q6NSI4 855 aaKnown RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 RPL10LQ96L21 214 aaKnown RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 CAMK1GQ96NX5 476 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 RPRD1AQ96P16 312 aaPredicted RBP16.8■□□□□ 0.28
SETD1A-203ENST00000640410 IL21RQ9HBE5 538 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 SGK2Q9HBY8 427 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 VANGL2Q9ULK5 521 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
SETD1A-203ENST00000640410 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 TARSL2A2RTX5 802 aaKnown RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 M0QYT0 321 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 MID1O15344 667 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 SH3BP5O60239 455 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 FSBPO95073 299 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 TFE3P19532 575 aaPredicted RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 SNX16P57768 344 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 SIM1P81133 766 aaPredicted RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 KLHL30Q0D2K2 578 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 AUHQ13825 339 aaKnown RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 SPA17Q15506 151 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 CST6Q15828 149 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 TDRD12Q587J7 1177 aaKnown RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 TTC39BQ5VTQ0 682 aaPredicted RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 RNF219Q5W0B1 726 aaPredicted RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 C14orf80Q86SX3 495 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 TMEM35BQ8NCS4 154 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 OR52K2Q8NGK3 314 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 GANCQ8TET4 914 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 BIRC7Q96CA5 298 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 NPY6RQ99463 290 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 ORAI3Q9BRQ5 295 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 PDCL3Q9H2J4 239 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 ANLNQ9NQW6 1124 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
SETD1A-203ENST00000640410 EPN1Q9Y6I3 576 aaPredicted RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 NYNRINQ9P2P1 1898 aaKnown RBP16.79■□□□□ 0.28
SETD1A-203ENST00000640410 EDDM13A0A1B0GTR0 161 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 A0A1W2PP55 124 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 EPHB6O15197 1021 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 PAGE1O75459 146 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 KRT37O76014 449 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 GFPT2O94808 682 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 TUBB4AP04350 444 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 CCDC175P0C221 793 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 VAV1P15498 845 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SOX5P35711 763 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 MATKP42679 507 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 PLK1P53350 603 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 RNASE9P60153 205 aaKnown RBP16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SLC14A1Q13336 389 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SLC12A1Q13621 1099 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 LAYNQ6UX15 382 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 USP30Q70CQ3 517 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 NOP9Q86U38 636 aaKnown RBP16.78■□□□□ 0.28
SETD1A-203ENST00000640410 ZDHHC17Q8IUH5 632 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 ALG14Q96F25 216 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 FAM129BQ96TA1 746 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 GAREM1Q9H706 876 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
SETD1A-203ENST00000640410 TM9SF3Q9HD45 589 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 KCND1Q9NSA2 647 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 PIGVQ9NUD9 493 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SCML1Q9UN30 329 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 NCKAP1Q9Y2A7 1128 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 FNDC3AQ9Y2H6 1198 aaKnown RBP16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SNX10Q9Y5X0 201 aa16.78■□□□□ 0.28
SETD1A-203ENST00000640410 SPEGQ15772 3267 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms