RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PIK3R2O00459 728 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 TERTO14746 1132 aaKnown RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 URI1O94763 535 aaPredicted RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 CCDC175P0C221 793 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 RARGP13631 454 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 TUBB2AQ13885 445 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 C6orf132Q5T0Z8 1188 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 SFMBT2Q5VUG0 894 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 INO80CQ6PI98 192 aaPredicted RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 TMEM270Q6UE05 265 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 ZNF574Q6ZN55 896 aaPredicted RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 UBA3Q8TBC4 463 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 GANCQ8TET4 914 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 UBXN4Q92575 508 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 NT5C1BQ96P26 610 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 TUBB2BQ9BVA1 445 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 SLC2A11Q9BYW1 496 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 EBF2Q9HAK2 575 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 PRSS16Q9NQE7 514 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 ANKMY1Q9P2S6 941 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 PLA2G4CQ9UP65 541 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 SCML2Q9UQR0 700 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 PCDHB4Q9Y5E5 795 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
HLA-C-210ENST00000640219 USP9XQ93008 2570 aaPredicted RBP14.23□□□□□ -0.13
HLA-C-210ENST00000640219 ITIH6Q6UXX5 1313 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 A0A1W2PR77 199 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 PNMA6AP0CW24 399 aaPredicted RBP14.22□□□□□ -0.13
HLA-C-210ENST00000640219 SLC9A1P19634 815 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 RXRGP48443 463 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 LSSP48449 732 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 GALCP54803 685 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 MARSP56192 900 aaKnown RBP14.22□□□□□ -0.13
HLA-C-210ENST00000640219 CBX1P83916 185 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 PROX2Q3B8N5 592 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 CDKAL1Q5VV42 579 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 KANSL1Q7Z3B3 1105 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 OXR1Q8N573 874 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 TC2NQ8N9U0 490 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 EHBP1Q8NDI1 1231 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 DDI1Q8WTU0 396 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 GOLGA1Q92805 767 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 VCPIP1Q96JH7 1222 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 DUSP16Q9BY84 665 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 POLR1BQ9H9Y6 1135 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 THSD1Q9NS62 852 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-C-210ENST00000640219 LIMA1Q9UHB6 759 aaKnown RBP14.22□□□□□ -0.13
HLA-C-210ENST00000640219 TSPAN16Q9UKR8 245 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
HLA-C-210ENST00000640219 TLR4O00206 839 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 WNT9AO14904 365 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 USP12O75317 370 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 HMBSP08397 361 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 CORO1AP31146 461 aaKnown RBP14.21□□□□□ -0.13
HLA-C-210ENST00000640219 MTIF2P46199 727 aaKnown RBP14.21□□□□□ -0.13
HLA-C-210ENST00000640219 RGS7P49802 495 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 ADKP55263 362 aaKnown RBP14.21□□□□□ -0.13
HLA-C-210ENST00000640219 NXPH1P58417 271 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 GNG11P61952 73 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 TUBB4BP68371 445 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 PDE4CQ08493 712 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 TSR1Q2NL82 804 aaKnown RBP14.21□□□□□ -0.13
HLA-C-210ENST00000640219 ZNF776Q68DI1 518 aaPredicted RBP14.21□□□□□ -0.13
HLA-C-210ENST00000640219 NCEH1Q6PIU2 408 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 FOXR2Q6PJQ5 311 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 ATG14Q6ZNE5 492 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 SCD5Q86SK9 330 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 PIGZQ86VD9 579 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 TMTC1Q8IUR5 882 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 EXD3Q8N9H8 876 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 DCLK3Q9C098 648 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 ERVMER34-1Q9H9K5 563 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 ASCL3Q9NQ33 180 aa14.21□□□□□ -0.13
HLA-C-210ENST00000640219 O00370 1275 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 GABBR2O75899 941 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 GNA14O95837 355 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 COG7P83436 770 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 ARHGAP44Q17R89 818 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 SGO2Q562F6 1265 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 SLC45A4Q5BKX6 768 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 USP30Q70CQ3 517 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 TADA2BQ86TJ2 420 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 TMEM139Q8IV31 216 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 FBXL12Q9NXK8 326 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 AGO1Q9UL18 857 aaKnown RBP14.2□□□□□ -0.14
HLA-C-210ENST00000640219 SCML1Q9UN30 329 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 DOPEY2Q9Y3R5 2298 aa14.2□□□□□ -0.14
HLA-C-210ENST00000640219 LRRC72A6NJI9 287 aa14.19□□□□□ -0.14
HLA-C-210ENST00000640219 EFCAB8A8MWE9 144 aa14.19□□□□□ -0.14
HLA-C-210ENST00000640219 SIGLEC6O43699 453 aa14.19□□□□□ -0.14
HLA-C-210ENST00000640219 KIF5CO60282 957 aa14.19□□□□□ -0.14
HLA-C-210ENST00000640219 GP1BBP13224 206 aa14.19□□□□□ -0.14
HLA-C-210ENST00000640219 KRT5P13647 590 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms