RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 IKBKEQ14164 716 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 UBR7Q8N806 425 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SHCBP1Q8NEM2 672 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 CPT1BQ92523 772 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 HAS1Q92839 578 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 TMEM246Q9BRR3 403 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 NOX1Q9Y5S8 564 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 MYO1GB0I1T2 1018 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 POLRMTO00411 1230 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 HDAC3O15379 428 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 TGFB1I1O43294 461 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 CHRNB1P11230 501 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 PRKACAP17612 351 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 PRKAA1Q13131 559 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SLC13A2Q13183 592 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 RAB39AQ14964 217 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SNX29P2Q8IUI4 249 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 UNC45BQ8IWX7 931 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 GALNT12Q8IXK2 581 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 UNCXA6NJT0 531 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 AREL1O15033 823 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 PRKD3O94806 890 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 UGT2B4P06133 528 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 POLBP06746 335 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 RPL14P50914 215 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 RPL7AP62424 266 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 CDKL1Q00532 357 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 HERC3Q15034 1050 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 ANGEL2Q5VTE6 544 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 GPAT2Q6NUI2 795 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 PGAM4Q8N0Y7 254 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 RNF34Q969K3 372 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 VCPIP1Q96JH7 1222 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 RERGLQ9H628 205 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 EHD3Q9NZN3 535 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 PCDHGC3Q9UN70 934 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SNX8Q9Y5X2 465 aa11.3□□□□□ -0.6
SPIN3-230ENST00000639888 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIN3-230ENST00000639888 A0A096LPK6 155 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 LZTS3O60299 673 aaPredicted RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PDGFRAP16234 1089 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 STRA8Q7Z7C7 330 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ERO1BQ86YB8 467 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 RDM1Q8NG50 284 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 LRRN4Q8WUT4 740 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 APBB2Q92870 758 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 CCDC106Q9BWC9 280 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 MAGEE1Q9HCI5 957 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SPAG4Q9NPE6 437 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 TBC1D22BQ9NU19 505 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 MINPP1Q9UNW1 487 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 RUVBL2Q9Y230 463 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 LRRC37A3O60309 1634 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PCNAP12004 261 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ADSLP30566 484 aaPredicted RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 GABRB2P47870 512 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SLC9A3P48764 834 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 TAP1Q03518 808 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 MERTKQ12866 999 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PON2Q15165 354 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 GK5Q6ZS86 529 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 IGFN1Q86VF2 1251 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 FAR2Q96K12 515 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 HEXIM2Q96MH2 286 aaKnown RBP11.29□□□□□ -0.6
SPIN3-230ENST00000639888 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 MED7O43513 233 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ATE1O95260 518 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 MSL3P1P0C860 447 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 FAM83EQ2M2I3 478 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 PITRM1Q5JRX3 1037 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 OR7G1Q8NGA0 311 aa11.29□□□□□ -0.6
SPIN3-230ENST00000639888 SEPT8Q92599 483 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms