RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MAN1A2O60476 641 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 DLGAP3O95886 979 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 HGFP14210 728 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ITIH1P19827 911 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MBTD1Q05BQ5 628 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 LAMTOR4Q0VGL1 99 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CBLBQ13191 982 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KIF26BQ2KJY2 2108 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MIDNQ504T8 468 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 LYPLAL1Q5VWZ2 237 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 Q6ZS92 163 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 AACSQ86V21 672 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ARL10Q8N8L6 244 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF548Q8NEK5 533 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 SGSM3Q96HU1 749 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ADPGKQ9BRR6 497 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 SLC2A11Q9BYW1 496 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 TRIM9Q9C026 710 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 GLT8D2Q9H1C3 349 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 C12orf49Q9H741 205 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MINDY3Q9H8M7 445 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 GPAMQ9HCL2 828 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ACSS2Q9NR19 701 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 TOPORSQ9NS56 1045 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 PRMT7Q9NVM4 692 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KLK14Q9P0G3 267 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 DAAM1Q9Y4D1 1078 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MGAM2Q2M2H8 2515 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 TARSL2A2RTX5 802 aaKnown RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 C21orf140B9A014 251 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 PRRT4C9JH25 899 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KLRF2D3W0D1 207 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 H7C1Q1 480 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 SDC3O75056 442 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CSF2P04141 144 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CYP11A1P05108 521 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ARAFP10398 606 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MUTP22033 750 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 GMPRP36959 345 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 GYS2P54840 703 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 NKX6-1P78426 367 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 RBPJQ06330 500 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MGAT5BQ3V5L5 792 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 PLEKHN1Q494U1 663 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ZFYVE27Q5T4F4 411 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CEACAM20Q6UY09 585 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KIAA0907Q7Z7F0 614 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 FAM124AQ86V42 546 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 HOMER1Q86YM7 354 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 DCP1BQ8IZD4 617 aaKnown RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CLASRPQ8N2M8 674 aaKnown RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 FAR1Q8WVX9 515 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 MEIS3Q99687 375 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 SEPT5Q99719 369 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 TMEM121Q9BTD3 319 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 C1QTNF2Q9BXJ5 285 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 KLF16Q9BXK1 252 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 ILKAPQ9H0C8 392 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 RSPH9Q9H1X1 276 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 DHX33Q9H6R0 707 aaKnown RBP3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CRTAC1Q9NQ79 661 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 FAM13BQ9NYF5 915 aa3.65□□□□□ -1.83
CCDC7-213ENST00000639290 CITO14578 2027 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 AQP9O43315 295 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 KLF4O43474 513 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 RPLP0P05388 317 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CYP3A4P08684 503 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 HOXD4P09016 255 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 MCM4P33991 863 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CCNFP41002 786 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 ST13P50502 369 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PPP2CBP62714 309 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PPP2CAP67775 309 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 SQSTM1Q13501 440 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PTK2BQ14289 1009 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 NFE2Q16621 373 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 LIPNQ5VXI9 398 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 SEZ6L2Q6UXD5 910 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PAQR7Q86WK9 346 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 IQCA1Q86XH1 822 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PLD6Q8N2A8 252 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 MEIOBQ8N635 442 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 KDM1BQ8NB78 822 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 WFIKKN2Q8TEU8 576 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 OVCA2Q8WZ82 227 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 ESR2Q92731 530 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 IL12RB2Q99665 862 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 EBF2Q9HAK2 575 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 TRPC7Q9HCX4 862 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 SPASTQ9UBP0 616 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 STRIP2Q9ULQ0 834 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 PCDHA6Q9UN73 950 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 MYO18AQ92614 2054 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 LMO7DNF2Z398 122 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CCL21O00585 134 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 RNASEH1O60930 286 aaKnown RBP3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CREG1O75629 220 aa3.64□□□□□ -1.83
CCDC7-213ENST00000639290 CTAG2O75638 210 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms