RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 GTF3C2Q8WUA4 911 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 BAP1Q92560 729 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RBM4BQ9BQ04 359 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 C17orf62Q9BQA9 187 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RBM4Q9BWF3 364 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CYP39A1Q9NYL5 469 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MAGED2Q9UNF1 606 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MROH7Q68CQ1 1323 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 DPYSL4O14531 572 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TNPO2O14787 897 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GAS7O60861 476 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LRG1P02750 347 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FGF4P08620 206 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ITGB6P18564 788 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 NFKB1P19838 968 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RAB3AP20336 220 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MAPK12P53778 367 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 AMPD2Q01433 879 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 STRN3Q13033 797 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ADAM15Q13444 863 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MED21Q13503 144 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MBTPS1Q14703 1052 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TRIP13Q15645 432 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MEA1Q16626 185 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ACAD11Q709F0 780 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 DTD1Q8TEA8 209 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ANAPC16Q96DE5 110 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TEKT5Q96M29 485 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ADAM33Q9BZ11 813 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PCDHAC2Q9Y5I4 1007 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ADCY9O60503 1353 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TOP2AP11388 1531 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PI15O43692 258 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MFAP3LO75121 409 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 NOL4O94818 638 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GDF11O95390 407 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CCND2P30279 289 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PPM1AP35813 382 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF280AP59817 542 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LRRC24Q50LG9 513 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM67Q5HYA8 995 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 NOMO2Q5JPE7 1267 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PXDC1Q5TGL8 231 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GARNL3Q5VVW2 1013 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CENPPQ6IPU0 288 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LHFPL3Q86UP9 236 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 KRT78Q8N1N4 520 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 KCTD6Q8NC69 237 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 BTN2A2Q8WVV5 523 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 KLHL6Q8WZ60 621 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SEC14L1Q92503 715 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SGCZQ96LD1 299 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LRFN5Q96NI6 719 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CCNL2Q96S94 520 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM120AQ9BXJ8 343 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 C2orf40Q9H1Z8 148 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 C19orf12Q9NSK7 152 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SLC9A8Q9Y2E8 581 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PIKFYVEQ9Y2I7 2098 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CFAP74Q9C0B2 1584 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PRR23AA6NEV1 266 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PRR5-ARHGAP8B1AHC4 643 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SEC22BO75396 215 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZWINTO95229 277 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 S100A8P05109 93 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LYNP07948 512 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SAGP10523 405 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PRRX1P54821 245 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 MFAP3P55082 362 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 VAMP2P63027 116 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FLI1Q01543 452 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ILF3Q12906 894 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SLC14A1Q13336 389 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 KIF18BQ86Y91 864 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ST7LQ8TDW4 575 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LMF1Q96S06 567 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SPXQ9BT56 116 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CDADC1Q9BWV3 514 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FAM126AQ9BYI3 521 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SLC35D1Q9NTN3 355 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 NAALAD2Q9Y3Q0 740 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CHD2O14647 1828 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FAM221AA4D161 298 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PGRMC2O15173 223 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 VPS4BO75351 444 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CHRM3P20309 590 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PDIA3P30101 505 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PITPNBP48739 271 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GCNT1Q02742 428 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FDX2Q6P4F2 183 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TTC7BQ86TV6 843 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RCOR2Q8IZ40 523 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 OR52N1Q8NH53 320 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PROX1Q92786 737 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CRISPLD2Q9H0B8 497 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 LRMDAQ9H2I8 198 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms