RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 COL6A1P12109 1028 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 TYK2P29597 1187 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 HADHAP40939 763 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 FAM189BP81408 668 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 PDE1CQ14123 709 aaPredicted RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 SLC39A12Q504Y0 691 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 FASTKD1Q53R41 847 aaKnown RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 N4BP2L1Q5TBK1 243 aaPredicted RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 DPF3Q92784 378 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 CELF6Q96J87 481 aaKnown RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 C8orf48Q96LL4 319 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 FCRL3Q96P31 734 aaPredicted RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 TSEN34Q9BSV6 310 aaKnown RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 MECRQ9BV79 373 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 FTHL17Q9BXU8 183 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 FBXO44Q9H4M3 255 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 DONSONQ9NYP3 566 aa18.91■□□□□ 0.62
CLN8-211ENST00000636934 RPL26L1Q9UNX3 145 aaKnown RBP18.91■□□□□ 0.62
CLN8-211ENST00000636934 USP12O75317 370 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 LIMK2P53671 638 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 CCDC153Q494R4 210 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 MANEALQ5VSG8 457 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 MON1AQ86VX9 555 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 SCN4BQ8IWT1 228 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 NSL1Q96IY1 281 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 FCRL5Q96RD9 977 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 FAM96AQ9H5X1 160 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 CD248Q9HCU0 757 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 THSD7BQ9C0I4 1608 aa18.9■□□□□ 0.62
CLN8-211ENST00000636934 SYN3O14994 580 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 PLIN3O60664 434 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 CCDC22O60826 627 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 EZRP15311 586 aaKnown RBP18.89■□□□□ 0.61
CLN8-211ENST00000636934 CCND1P24385 295 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 GRK2P25098 689 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 MAGEA12P43365 314 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 CDK7P50613 346 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 GEMP55040 296 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 MAP3K21Q5TCX8 1036 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 CES3Q6UWW8 571 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 STRA8Q7Z7C7 330 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 SCD5Q86SK9 330 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 REM2Q8IYK8 340 aaPredicted RBP18.89■□□□□ 0.61
CLN8-211ENST00000636934 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 SREK1Q8WXA9 508 aaKnown RBP18.89■□□□□ 0.61
CLN8-211ENST00000636934 CASP10Q92851 521 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 FCRL2Q96LA5 508 aaPredicted RBP18.89■□□□□ 0.61
CLN8-211ENST00000636934 SLC17A6Q9P2U8 582 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 NEU3Q9UQ49 428 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 PSAT1Q9Y617 370 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 FRMPD3Q5JV73 1810 aa18.89■□□□□ 0.61
CLN8-211ENST00000636934 ZCWPW2A0A1B0GU75 182 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CCDC195A0A1B0GUA6 201 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 MATN3O15232 486 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 ATP9BO43861 1147 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CBX6O95503 412 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 SERPINB3P29508 390 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CTC1Q2NKJ3 1217 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 ANO4Q32M45 955 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 TEDDM1Q5T9Z0 273 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 ARMC3Q5W041 872 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 PDPK2PQ6A1A2 396 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 MSANTD2Q6P1R3 559 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 KCNMB4Q86W47 210 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CCDC117Q8IWD4 279 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 ARHGAP12Q8IWW6 846 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 COLGALT2Q8IYK4 626 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 ZSCAN18Q8TBC5 510 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 SLC7A6OSQ96CW6 309 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 C1orf74Q96LT6 269 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 IL12RB2Q99665 862 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 GLOD4Q9HC38 313 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 RNF186Q9NXI6 227 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 SRRDQ9UH36 339 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 PCDHB5Q9Y5E4 795 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 A0A1W2PQH9 124 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 WASH4PA8MWX3 477 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 KCNU1A8MYU2 1149 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 DDHD2O94830 711 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CALB2P22676 271 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 MAGEA11P43364 429 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 OR1G1P47890 313 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 TUBP50607 506 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 NOGQ13253 232 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 TBCCQ15814 346 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CLLU1OSQ5K130 101 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 CERCAMQ5T4B2 595 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 RTN4RL1Q86UN2 441 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 ARID3BQ8IVW6 561 aaPredicted RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLN8-211ENST00000636934 RTL3Q8N8U3 475 aaKnown RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 PTCD2Q8WV60 388 aaKnown RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 TBL1YQ9BQ87 522 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 KIFC1Q9BW19 673 aa18.88■□□□□ 0.61
CLN8-211ENST00000636934 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLN8-211ENST00000636934 STN1Q9H668 368 aaKnown RBP18.88■□□□□ 0.61
CLN8-211ENST00000636934 TLE6Q9H808 572 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms