RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 SREK1Q8WXA9 508 aaKnown RBP22.01■■□□□ 1.11
CLN5-215ENST00000636767 DGCR14Q96DF8 476 aaKnown RBP22.01■■□□□ 1.11
CLN5-215ENST00000636767 CDRT15Q96T59 188 aa22.01■■□□□ 1.11
CLN5-215ENST00000636767 ILKAPQ9H0C8 392 aaPredicted RBP22.01■■□□□ 1.11
CLN5-215ENST00000636767 PDLIM1O00151 329 aa22■■□□□ 1.11
CLN5-215ENST00000636767 KCNK1O00180 336 aa22■■□□□ 1.11
CLN5-215ENST00000636767 VILLO15195 856 aa22■■□□□ 1.11
CLN5-215ENST00000636767 GRM5P41594 1212 aa22■■□□□ 1.11
CLN5-215ENST00000636767 MATKP42679 507 aa22■■□□□ 1.11
CLN5-215ENST00000636767 RPL5P46777 297 aaKnown RBP22■■□□□ 1.11
CLN5-215ENST00000636767 PID1Q7Z2X4 250 aa22■■□□□ 1.11
CLN5-215ENST00000636767 DEFB132Q7Z7B7 95 aa22■■□□□ 1.11
CLN5-215ENST00000636767 TMEM135Q86UB9 458 aa22■■□□□ 1.11
CLN5-215ENST00000636767 TICAM1Q8IUC6 712 aa22■■□□□ 1.11
CLN5-215ENST00000636767 DEFB106AQ8N104 65 aa22■■□□□ 1.11
CLN5-215ENST00000636767 Q9H521 79 aa22■■□□□ 1.11
CLN5-215ENST00000636767 PDGFCQ9NRA1 345 aa22■■□□□ 1.11
CLN5-215ENST00000636767 OXSMQ9NWU1 459 aa22■■□□□ 1.11
CLN5-215ENST00000636767 VANGL2Q9ULK5 521 aa22■■□□□ 1.11
CLN5-215ENST00000636767 RAB26Q9ULW5 256 aa22■■□□□ 1.11
CLN5-215ENST00000636767 G3BP2Q9UN86 482 aaKnown RBP22■■□□□ 1.11
CLN5-215ENST00000636767 HES2Q9Y543 173 aa22■■□□□ 1.11
CLN5-215ENST00000636767 CNMDO75829 334 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 AMHP03971 560 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 EPHA3P29320 983 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 RGS2P41220 211 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 CCR10P46092 362 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 ITGA7Q13683 1181 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.99■■□□□ 1.11
CLN5-215ENST00000636767 PABPC1LQ4VXU2 614 aaKnown RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 HSP90AA5PQ58FG0 334 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 NLRP7Q8WX94 980 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 NDRG1Q92597 394 aaKnown RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 RCN3Q96D15 328 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 MPP4Q96JB8 637 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 LRGUKQ96M69 825 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 AP4B1Q9Y6B7 739 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 HDAC3O15379 428 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 CREB3O43889 395 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 CLPTM1O96005 669 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 MSX2P35548 267 aaPredicted RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 VGLL4Q14135 290 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 TTLL12Q14166 644 aaPredicted RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 MAP7Q14244 749 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 SLC25A52Q3SY17 297 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 METTL25Q8N6Q8 603 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 RP9Q8TA86 221 aaKnown RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 ZNF385DQ9H6B1 395 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 PRDM16Q9HAZ2 1276 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 PTTG2Q9NZH5 202 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 KLHL8Q9P2G9 620 aaPredicted RBP21.99■■□□□ 1.11
CLN5-215ENST00000636767 VPS28Q9UK41 221 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 LZTS1Q9Y250 596 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 RAP2CQ9Y3L5 183 aa21.99■■□□□ 1.11
CLN5-215ENST00000636767 PDGFRBP09619 1106 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 CEACAM7Q14002 265 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 PAFAH1B3Q15102 231 aaKnown RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 SEL1L3Q68CR1 1132 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 ZFP1Q6P2D0 407 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 RBM44Q6ZP01 1051 aaKnown RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 TMEM126BQ8IUX1 230 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 PSTKQ8IV42 348 aaKnown RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 LILRA2Q8N149 483 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 ADAM32Q8TC27 787 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 TRPM4Q8TD43 1214 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 C18orf25Q96B23 403 aaPredicted RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 MFSD3Q96ES6 412 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 ATXN10Q9UBB4 475 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 TK2O00142 265 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 AP2A1O95782 977 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 PKNOX1P55347 436 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 CYLC2Q14093 348 aaPredicted RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 FRG1Q14331 258 aaKnown RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 GK3PQ14409 553 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 LRRC23Q53EV4 343 aaPredicted RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 KBTBD7Q8WVZ9 684 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 HIC2Q96JB3 615 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 ACE2Q9BYF1 805 aaPredicted RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 DRC3Q9H069 523 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 COPS7BQ9H9Q2 264 aaPredicted RBP21.98■■□□□ 1.11
CLN5-215ENST00000636767 PAPPA2Q9BXP8 1791 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 RALGAPA2Q2PPJ7 1873 aa21.98■■□□□ 1.11
CLN5-215ENST00000636767 SYNJ2BP-COX16A0A087WUM0 186 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 GRID2O43424 1007 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 PTPN3P26045 913 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 PPARGP37231 505 aaPredicted RBP21.97■■□□□ 1.11
CLN5-215ENST00000636767 DPP6P42658 865 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 ACADSBP45954 432 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 RPL14P50914 215 aaKnown RBP21.97■■□□□ 1.11
CLN5-215ENST00000636767 MYBPC1Q00872 1141 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 MS4A2Q01362 244 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 MPP3Q13368 585 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 DPYSQ14117 519 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 NADK2Q4G0N4 442 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 CPSF7Q8N684 471 aaKnown RBP21.97■■□□□ 1.11
CLN5-215ENST00000636767 FAM149B1Q96BN6 582 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 CNBD2Q96M20 576 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 MCMBPQ9BTE3 642 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 NUF2Q9BZD4 464 aa21.97■■□□□ 1.11
CLN5-215ENST00000636767 BFARQ9NZS9 450 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms