RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ADAMTS1Q9UHI8 967 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 NEUROG3Q9Y4Z2 214 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 PCDHGB2Q9Y5G2 931 aa18.43■□□□□ 0.54
PNKP-225ENST00000636214 KMT2BQ9UMN6 2715 aaPredicted RBP18.43■□□□□ 0.54
PNKP-225ENST00000636214 A0A1W2PPC4 97 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 FAM170AA1A519 330 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 TMEM8BA6NDV4 472 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 C1QTNF9BB2RNN3 333 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 BNIP3LO60238 219 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 ADCY5O95622 1261 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 TOP3BO95985 862 aaKnown RBP18.42■□□□□ 0.54
PNKP-225ENST00000636214 C1QTNF9P0C862 333 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 CXCR3P49682 368 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 RACK1P63244 317 aaKnown RBP18.42■□□□□ 0.54
PNKP-225ENST00000636214 FAM193AP78312 1265 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 SLC25A52Q3SY17 297 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 C6orf118Q5T5N4 469 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 NAA35Q5VZE5 725 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 NOP9Q86U38 636 aaKnown RBP18.42■□□□□ 0.54
PNKP-225ENST00000636214 PTPRN2Q92932 1015 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 PGAP3Q96FM1 320 aaPredicted RBP18.42■□□□□ 0.54
PNKP-225ENST00000636214 TBCBQ99426 244 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 NAA15Q9BXJ9 866 aaKnown RBP18.42■□□□□ 0.54
PNKP-225ENST00000636214 ANO10Q9NW15 660 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 ARHGEF38Q9NXL2 777 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 SERGEFQ9UGK8 458 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 DAAM1Q9Y4D1 1078 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 SNX11Q9Y5W9 270 aa18.42■□□□□ 0.54
PNKP-225ENST00000636214 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3DA0A087WVF3 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3IA0A087WXS9 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3EA0A087X179 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3KA0A087X1G2 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3FA6NER0 549 aaPredicted RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3LB9A6J9 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 DFNA5O60443 496 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 GFPT2O94808 682 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 MMEP08473 750 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3HP0C7X1 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 FTH1P19P0C7X4 201 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 CCR5P51681 352 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 POLR2FP61218 127 aaKnown RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 BNC1Q01954 994 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 KRT31Q15323 416 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 DLG2Q15700 870 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3GQ6DHY5 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3CQ6IPX1 549 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 DPY19L2P1Q6NXN4 242 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 C14orf80Q86SX3 495 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 SETD3Q86TU7 594 aaPredicted RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D3Q8IZP1 549 aaPredicted RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 EPS8L1Q8TE68 723 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 CPA5Q8WXQ8 436 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 FAM129BQ96TA1 746 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 CDC6Q99741 560 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 FAM207AQ9NSI2 230 aaPredicted RBP18.41■□□□□ 0.54
PNKP-225ENST00000636214 PCOLCE2Q9UKZ9 415 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 WASF3Q9UPY6 502 aa18.41■□□□□ 0.54
PNKP-225ENST00000636214 ALOX15BO15296 676 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 ATP9BO43861 1147 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 KRT37O76014 449 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 IGHV4-34P06331 123 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 VAV1P15498 845 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
PNKP-225ENST00000636214 VASPP50552 380 aaPredicted RBP18.4■□□□□ 0.54
PNKP-225ENST00000636214 IRAK1P51617 712 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 ADPRHP54922 357 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 NOMO3P69849 1222 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 CCDC15Q0P6D6 951 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 SYCP1Q15431 976 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 C5orf22Q49AR2 442 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 OTUD1Q5VV17 481 aaPredicted RBP18.4■□□□□ 0.54
PNKP-225ENST00000636214 LAYNQ6UX15 382 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 CHCHD4Q8N4Q1 142 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 ATP11CQ8NB49 1132 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 SLC6A18Q96N87 628 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 GANQ9H2C0 597 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 KLK13Q9UKR3 277 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 TBC1D30Q9Y2I9 924 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 MSRB2Q9Y3D2 182 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 SLCO1B1Q9Y6L6 691 aa18.4■□□□□ 0.54
PNKP-225ENST00000636214 TMEM131Q92545 1883 aa18.39■□□□□ 0.54
PNKP-225ENST00000636214 SLC7A4O43246 635 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 SRGAP2O75044 1071 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 CNTN5O94779 1100 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 TFE3P19532 575 aaPredicted RBP18.39■□□□□ 0.53
PNKP-225ENST00000636214 FLT3P36888 993 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 STAT1P42224 750 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 RECQLP46063 649 aaPredicted RBP18.39■□□□□ 0.53
PNKP-225ENST00000636214 CDR2Q01850 454 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 STX1AQ16623 288 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 ARL13BQ3SXY8 428 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 C2CD6Q53TS8 623 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 CDKAL1Q5VV42 579 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 TRIM72Q6ZMU5 477 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 Q6ZVU0 165 aa18.39■□□□□ 0.53
PNKP-225ENST00000636214 TFAP2DQ7Z6R9 452 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms