RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PEX19P40855 299 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 USP46P62068 366 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 FKBP1BP68106 108 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 CRYMQ14894 314 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MUM1Q2TAK8 710 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MORN1Q5T089 497 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 SPATS2Q86XZ4 545 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 C10orf107Q8IVU9 208 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MSL3Q8N5Y2 521 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 UBR7Q8N806 425 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 EIF1ADQ8N9N8 165 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
PKP4-217ENST00000628904 ZMIZ2Q8NF64 920 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 KCTD4Q8WVF5 259 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 SREK1Q8WXA9 508 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 NUF2Q9BZD4 464 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 CCDC68Q9H2F9 335 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 WDR55Q9H6Y2 383 aaPredicted RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 FZD10Q9ULW2 581 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 PLA2G4CQ9UP65 541 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 ERI2A8K979 691 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 TK2O00142 265 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CDH13P55290 713 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 RPS24P62847 133 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 DSC2Q02487 901 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CUL3Q13618 768 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PTPRRQ15256 657 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 VARS2Q5ST30 1063 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 C6orf163Q5TEZ5 329 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ATG16L1Q676U5 607 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 SCIMPQ6UWF3 145 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 NT5DC4Q86YG4 428 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CARNMT1Q8N4J0 409 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PSMG2Q969U7 264 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PPP1R10Q96QC0 940 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 HBEGFQ99075 208 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ACTR5Q9H9F9 607 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 XAB2Q9HCS7 855 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 TBC1D13Q9NVG8 400 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 MTO1Q9Y2Z2 717 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 KCTD3Q9Y597 815 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 COL1A2P08123 1366 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 DCXO43602 365 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TLR5O60602 858 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 GPC4O75487 556 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ZWINTO95229 277 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CKBP12277 381 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ENO3P13929 434 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 PTPN3P26045 913 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 YWHAQP27348 245 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CDH5P33151 784 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 RASA2Q15283 850 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 INTS6LQ5JSJ4 861 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 C1orf146Q5VVC0 180 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CRYBG2Q8N1P7 616 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 OR7D4Q8NG98 312 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TTC8Q8TAM2 541 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CCT6BQ92526 530 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TMA16Q96EY4 203 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 WDR83Q9BRX9 315 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 SLC39A8Q9C0K1 460 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 NMUR2Q9GZQ4 415 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PIF1Q9H611 641 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CERS4Q9HA82 394 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TMEM216Q9P0N5 145 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 SLC24A2Q9UI40 661 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CDH9Q9ULB4 789 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 V9GYQ6 96 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 COL11A1P12107 1806 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 TCRBV5S1A1TA0A578 114 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 FCHO1O14526 889 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CLGNO14967 610 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 B4GALT3O60512 393 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 DCTN3O75935 186 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ITGA2BP08514 1039 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PGM1P36871 562 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 PAPOLAP51003 745 aaKnown RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 MMEL1Q495T6 779 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TCHHL1Q5QJ38 904 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 ITPRIPL1Q6GPH6 555 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 NIPA2Q8N8Q9 360 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 OR52K2Q8NGK3 314 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CDC26Q8NHZ8 85 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 SLC26A7Q8TE54 656 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 USP13Q92995 863 aaPredicted RBP7.66□□□□□ -1.18
PKP4-217ENST00000628904 CERS2Q96G23 380 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 YY1AP1Q9H869 796 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 TXLNGQ9NUQ3 528 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 CIDEBQ9UHD4 219 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 AK5Q9Y6K8 562 aa7.66□□□□□ -1.18
PKP4-217ENST00000628904 ZNF831Q5JPB2 1677 aa7.65□□□□□ -1.18
PKP4-217ENST00000628904 CHADO15335 359 aa7.65□□□□□ -1.18
PKP4-217ENST00000628904 ITM2AO43736 263 aa7.65□□□□□ -1.18
PKP4-217ENST00000628904 SH3BGRLO75368 114 aa7.65□□□□□ -1.18
PKP4-217ENST00000628904 ASMTLO95671 621 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms