RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 HELZP42694 1942 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 TCRBV7S3A2A0A539 114 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 KANSL1LA0AUZ9 987 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 NRG2O14511 850 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 TLR5O60602 858 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ACTN2P35609 894 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 IRAK1P51617 712 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 TWF1Q12792 350 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 GPS2Q13227 327 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 XRCC4Q13426 336 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 PRKD1Q15139 912 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 SLC45A4Q5BKX6 768 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 C10orf120Q5SQS8 335 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ANKRD22Q5VYY1 191 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 PDZD4Q76G19 769 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 GRASPQ7Z6J2 395 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 TADA2BQ86TJ2 420 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 CDKL3Q8IVW4 592 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF276Q8N554 614 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 CPT1BQ92523 772 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 TRMT2BQ96GJ1 504 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF512Q96ME7 567 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 LGMNQ99538 433 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 NDFIP2Q9NV92 336 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 ANAPC5Q9UJX4 755 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 INSL5Q9Y5Q6 135 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 R4GN57 208 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 DOCK8Q8NF50 2099 aa9.76□□□□□ -0.85
PDLIM5-223ENST00000627587 KCNN4O15554 427 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 SYF2O95926 243 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 APOEP02649 317 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 DCNP07585 359 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 EPHB2P29323 1055 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 HTR7P34969 479 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MLLT6P55198 1093 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 TBX4P57082 545 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 NRG1Q02297 640 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 TRIP4Q15650 581 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MLF2Q15773 248 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 SLC44A4Q53GD3 710 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MS4A13Q5J8X5 152 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 DGLUCYQ7Z3D6 616 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MIB1Q86YT6 1006 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 NAT8LQ8N9F0 302 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 PRCCQ92733 491 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 ZIM3Q96PE6 472 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 FERMT1Q9BQL6 677 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 SIK2Q9H0K1 926 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 TSPYL1Q9H0U9 437 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF334Q9HCZ1 680 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 MARCH2Q9P0N8 246 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 SLC12A6Q9UHW9 1150 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 ATP8A1Q9Y2Q0 1164 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 CFAP54Q96N23 3096 aa9.75□□□□□ -0.85
PDLIM5-223ENST00000627587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 HACD1B0YJ81 288 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 COCHO43405 550 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 LAMTOR5O43504 91 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TMEM63AO94886 807 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 MOCS2O96007 188 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 C8AP07357 584 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 SERPINB6P35237 376 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 KPNA1P52294 538 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 EPHB3P54753 998 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PLD1Q13393 1074 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 DNAJB7Q7Z6W7 309 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PCGF5Q86SE9 256 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ARHGAP12Q8IWW6 846 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ZSCAN18Q8TBC5 510 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PSMG2Q969U7 264 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 C1orf74Q96LT6 269 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PRMT1Q99873 361 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 SH3GL2Q99962 352 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TRPM5Q9NZQ8 1165 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 UXTQ9UBK9 157 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ZNF212Q9UDV6 495 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 TPX2Q9ULW0 747 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 MRPS17Q9Y2R5 130 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 RAD54BQ9Y620 910 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 IGLV3-10A0A075B6K4 115 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 C2orf78A6NCI8 922 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 E9PAM4 449 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PPP1R12AO14974 1030 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 GCATO75600 419 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 OAS1P00973 400 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 ATP5C1P36542 298 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 PPP3CCP48454 512 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 RING1Q06587 406 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 GALNT2Q10471 571 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 WASHC5Q12768 1159 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 MTA1Q13330 715 aa9.74□□□□□ -0.85
PDLIM5-223ENST00000627587 KCNJ11Q14654 390 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms