RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 DDX50Q9BQ39 737 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 IPO11Q9UI26 975 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 SHOC2Q9UQ13 582 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 DOCK4Q8N1I0 1966 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 J3KR12 359 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 OPHN1O60890 802 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 RAMP2O60895 175 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 TBL1XO60907 577 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 STK10O94804 968 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 PAPLNO95428 1278 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 CD68P34810 354 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 HSD17B3P37058 310 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 ZCCHC9Q8N567 271 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF419Q96HQ0 510 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 FERMT1Q9BQL6 677 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 KLHL8Q9P2G9 620 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-211ENST00000625980 A0A0D9SEW6 157 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF197O14709 1029 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 MATN3O15232 486 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 CLDN11O75508 207 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 BANF1O75531 89 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 PSMB4P28070 264 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 PMS2P54278 862 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 MTM1Q13496 603 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 TEX44Q53QW1 395 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 FNBP1LQ5T0N5 605 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 C4orf22Q6V702 233 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 HOOK3Q86VS8 718 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF354CQ86Y25 554 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 CNTD1Q8N815 330 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 OR7D4Q8NG98 312 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 UBLCP1Q8WVY7 318 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 BHMTQ93088 406 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 GORASP1Q9BQQ3 440 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 SEMA4AQ9H3S1 761 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF576Q9H609 170 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 NSUN3Q9H649 340 aaKnown RBP13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 TDP1Q9NUW8 608 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 DONSONQ9NYP3 566 aa13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
SPTAN1-211ENST00000625980 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 TCAF2A6NFQ2 919 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 CHADO15335 359 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 MTSS1O43312 755 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 PEX11BO96011 259 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 CCNB1P14635 433 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 SERINC3Q13530 473 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 SEMA5AQ13591 1074 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 PARP6Q2NL67 630 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 MSS51Q4VC12 460 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 HP1BP3Q5SSJ5 553 aaPredicted RBP13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 LEKR1Q6ZMV7 388 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 CHST9Q7L1S5 443 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 ARHGEF2Q92974 986 aaKnown RBP13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 TEKT5Q96M29 485 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 IL12RB2Q99665 862 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 DZANK1Q9NVP4 752 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 E2F8A0AVK6 867 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 NDC80O14777 642 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 APRTP07741 180 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 RHOCP08134 193 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 NFKB1P19838 968 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 FDFT1P37268 417 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 MAGEA6P43360 314 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 YBEYP58557 167 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 GNA12Q03113 381 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 FASTKD3Q14CZ7 662 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 PARP15Q460N3 678 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 FSCBQ5H9T9 825 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 CXorf57Q6NSI4 855 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TIGD7Q6NT04 549 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 OTOP3Q7RTS5 596 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ARID3BQ8IVW6 561 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 CARNMT1Q8N4J0 409 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 HJURPQ8NCD3 748 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 MAML1Q92585 1016 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms