RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ZSCAN18Q8TBC5 510 aaPredicted RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 TEKT5Q96M29 485 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 DCLRE1BQ9H816 532 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RAD54BQ9Y620 910 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 USP1O94782 785 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SERPINE1P05121 402 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 ITGB1P05556 798 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
TP53-227ENST00000622645 PGM1P36871 562 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 THPOP40225 353 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 PGGT1BP53609 377 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SESN3P58005 492 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 IRF9Q00978 393 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 PM20D1Q6GTS8 502 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SORT1Q99523 831 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
TP53-227ENST00000622645 TRHDEQ9UKU6 1024 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 DFFAO00273 331 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 KRT36O76013 467 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SERPINA6P08185 405 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 RALBP11234 206 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 ODC1P11926 461 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 CPA3P15088 417 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 YY1P25490 414 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 NMBRP28336 390 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SERPINB6P35237 376 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 PGFP49763 221 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 ERFP50548 548 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 LIMK2P53671 638 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 CDK18Q07002 472 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 TUBB3Q13509 450 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 TAF11Q15544 211 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 INSCQ1MX18 579 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
TP53-227ENST00000622645 VWA5B1Q5TIE3 1220 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 FAM171BQ6P995 826 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 CD300LGQ6UXG3 332 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 MAVSQ7Z434 540 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 RASAL3Q86YV0 1011 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 SPATA22Q8NHS9 363 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 DPF3Q92784 378 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 CLPTM1LQ96KA5 538 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 RRN3Q9NYV6 651 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 NUDT5Q9UKK9 219 aa12.22□□□□□ -0.45
TP53-227ENST00000622645 A0A096LPK6 155 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
TP53-227ENST00000622645 GPR182O15218 404 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 MTSS1O43312 755 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 RCN1Q15293 331 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 KCNMB4Q86W47 210 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 TMPRSS6Q8IU80 811 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
TP53-227ENST00000622645 FAM161BQ96MY7 647 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
TP53-227ENST00000622645 BRD8Q9H0E9 1235 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 DMAP1Q9NPF5 467 aaPredicted RBP12.21□□□□□ -0.45
TP53-227ENST00000622645 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.45
TP53-227ENST00000622645 TAGLN3Q9UI15 199 aa12.21□□□□□ -0.45
TP53-227ENST00000622645 MT-CYBP00156 380 aaPredicted RBP12.21□□□□□ -0.46
TP53-227ENST00000622645 MAGEA12P43365 314 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 MGAT3Q09327 533 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 MPP3Q13368 585 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 DBN1Q16643 649 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 MRPL10Q7Z7H8 261 aaKnown RBP12.21□□□□□ -0.46
TP53-227ENST00000622645 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 VAT1Q99536 393 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 MMADHCQ9H3L0 296 aaPredicted RBP12.21□□□□□ -0.46
TP53-227ENST00000622645 SFMBT1Q9UHJ3 866 aa12.21□□□□□ -0.46
TP53-227ENST00000622645 SHROOM3Q8TF72 1996 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
TP53-227ENST00000622645 SPECC1L-ADORA2AF8WAN1 911 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 MSI1O43347 362 aaKnown RBP12.2□□□□□ -0.46
TP53-227ENST00000622645 C2P06681 752 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 SAT1P21673 171 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 GRK2P25098 689 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 SERPINB8P50452 374 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
TP53-227ENST00000622645 METTL23Q86XA0 190 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 PPP4R1Q8TF05 950 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 IRGQQ8WZA9 623 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 IL22Q9GZX6 179 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
TP53-227ENST00000622645 APOBEC2Q9Y235 224 aaKnown RBP12.2□□□□□ -0.46
TP53-227ENST00000622645 MEI4A8MW99 385 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 NPY2RP49146 381 aa12.2□□□□□ -0.46
TP53-227ENST00000622645 IDH3AP50213 366 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms