RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ARL4AP40617 200 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 TAF11Q15544 211 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 SLC25A52Q3SY17 297 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 TIGD5Q53EQ6 642 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 OTUD1Q5VV17 481 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 LRRC8BQ6P9F7 803 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ALYREFQ86V81 257 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 TMEM173Q86WV6 379 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 PYROXD2Q8N2H3 581 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 CCDC33Q8N5R6 958 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 APPL2Q8NEU8 664 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ACMSDQ8TDX5 336 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 TMEM169Q96HH4 297 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 NAF1Q96HR8 494 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 WWP1Q9H0M0 922 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 XPO1O14980 1071 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 MFSD11O43934 449 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 DAB1O75553 588 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ODC1P11926 461 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 MYOGP15173 224 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 GCKP35557 465 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 NAB1Q13506 487 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 NAA25Q14CX7 972 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 KHDC1Q4VXA5 237 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 CD300LGQ6UXG3 332 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 KYAT3Q6YP21 454 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 CCNJLQ8IV13 435 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ARID3BQ8IVW6 561 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 SLC2A14Q8TDB8 520 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 CLP1Q92989 425 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 IGSF21Q96ID5 467 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 HBS1LQ9Y450 684 aaKnown RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 GBF1Q92538 1859 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 SHROOM3Q8TF72 1996 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 WDR27A2RRH5 827 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 LINC01553A4QN01 128 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 LIN7AO14910 233 aaPredicted RBP17.85■□□□□ 0.45
FAM3A-222ENST00000621967 OPHN1O60890 802 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 LUC7L3O95232 432 aaKnown RBP17.85■□□□□ 0.45
FAM3A-222ENST00000621967 GSRP00390 522 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 CA3P07451 260 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 TKTP29401 623 aaKnown RBP17.85■□□□□ 0.45
FAM3A-222ENST00000621967 PTDSS1P48651 473 aaKnown RBP17.85■□□□□ 0.45
FAM3A-222ENST00000621967 GLUD2P49448 558 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 ELAVL2Q12926 359 aaKnown RBP17.85■□□□□ 0.45
FAM3A-222ENST00000621967 FUT10Q6P4F1 479 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 CRLF3Q8IUI8 442 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 DEFB106AQ8N104 65 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 TOP6BLQ8N6T0 577 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 ARNTL2Q8WYA1 636 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 NT5C3BQ969T7 300 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 SUSD3Q96L08 255 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 LGMNQ99538 433 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 C20orf27Q9GZN8 174 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 SPG21Q9NZD8 308 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 RWDD3Q9Y3V2 267 aa17.85■□□□□ 0.45
FAM3A-222ENST00000621967 CCDC195A0A1B0GUA6 201 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 SDR42E2A6NKP2 422 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 CTNNB1P35222 781 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 SULT1E1P49888 294 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 RAB30Q15771 203 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 FAM131BQ86XD5 332 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 TEX9Q8N6V9 391 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 MCUR1Q96AQ8 359 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 ZNF395Q9H8N7 513 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-222ENST00000621967 ARMCX1Q9P291 453 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 MSRAQ9UJ68 235 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 H0Y3Z8 333 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 M0QZQ0 153 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 PGAM1P18669 254 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 WASHC5Q12768 1159 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 ACSBG2Q5FVE4 666 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 PACS1Q6VY07 963 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 PIGZQ86VD9 579 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 TREML1Q86YW5 311 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 UNC5BQ8IZJ1 945 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 RNF139Q8WU17 664 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 BCL7CQ8WUZ0 217 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-222ENST00000621967 P2RY11Q96G91 374 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 HNRNPABQ99729 332 aaKnown RBP17.84■□□□□ 0.45
FAM3A-222ENST00000621967 SIKE1Q9BRV8 207 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 NAT9Q9BTE0 207 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 PBX4Q9BYU1 374 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.84■□□□□ 0.45
FAM3A-222ENST00000621967 THAP1Q9NVV9 213 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 DSEQ9UL01 958 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 EMCNQ9ULC0 261 aa17.84■□□□□ 0.45
FAM3A-222ENST00000621967 H3BRJ5 948 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 RNF103O00237 685 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 STK10O94804 968 aaKnown RBP17.83■□□□□ 0.44
FAM3A-222ENST00000621967 ALDOAP04075 364 aaKnown RBP17.83■□□□□ 0.44
FAM3A-222ENST00000621967 PBX2P40425 430 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 RAP1GDS1P52306 607 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 STX3Q13277 289 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 TBCCQ15814 346 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 FAM171A1Q5VUB5 890 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 METTL23Q86XA0 190 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms