RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 COMTP21964 271 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 GLDCP23378 1020 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 HTR7P34969 479 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
CBWD3-217ENST00000621474 HCAR3P49019 387 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 STK19P49842 368 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-217ENST00000621474 GNA12Q03113 381 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 EOGTQ5NDL2 527 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 TRMT11Q7Z4G4 463 aaKnown RBP14.68□□□□□ -0.06
CBWD3-217ENST00000621474 NPWQ8N729 165 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 ZNF366Q8N895 744 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 UCMAQ8WVF2 138 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 RPL10LQ96L21 214 aaKnown RBP14.68□□□□□ -0.06
CBWD3-217ENST00000621474 KLHL11Q9NVR0 708 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 SLCO3A1Q9UIG8 710 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 VPS28Q9UK41 221 aa14.68□□□□□ -0.06
CBWD3-217ENST00000621474 NPC1O15118 1278 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ATP5BP06576 529 aaKnown RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 HOXB2P14652 356 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ERCC2P18074 760 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 HOXA6P31267 233 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 GJC1P36383 396 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ACVRL1P37023 503 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 OXCT1P55809 520 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ECT2LQ008S8 904 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 CSTF1Q05048 431 aaKnown RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 HADHQ16836 314 aaKnown RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ZNF528Q3MIS6 628 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 C11orf63Q6NUN7 778 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ZNF783Q6ZMS7 281 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 DCAF4L2Q8NA75 395 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ARHGEF2Q92974 986 aaKnown RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ERLEC1Q96DZ1 483 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 CSPG4P5Q96PW8 444 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ACE2Q9BYF1 805 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-217ENST00000621474 MUC3BQ9H195 1237 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 KCNF1Q9H3M0 494 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 MTG2Q9H4K7 406 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ETNK2Q9NVF9 386 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 VPS51Q9UID3 782 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ERVW-1Q9UQF0 538 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 MFHAS1Q9Y4C4 1052 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 ALG6Q9Y672 507 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 PLXND1Q9Y4D7 1925 aa14.67□□□□□ -0.06
CBWD3-217ENST00000621474 C3orf70A6NLC5 250 aaPredicted RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 DCLK1O15075 740 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MOCS3O95396 460 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 CD160O95971 181 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MT-CO1P00395 513 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 ASLP04424 464 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SLC1A1P43005 524 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SSR1P43307 286 aaKnown RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 PXNP49023 591 aaPredicted RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 ZNF135P52742 658 aaPredicted RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 CDH6P55285 790 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 ARF5P84085 180 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 DPYSL3Q14195 570 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SERPINA13PQ6UXR4 307 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 KIAA1328Q86T90 577 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 RASSF3Q86WH2 238 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 UMODL1-AS1Q8N2C9 162 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 LRRC57Q8N9N7 239 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MDGA1Q8NFP4 955 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 RAPGEF5Q92565 580 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 PRRX2Q99811 253 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 KCNH6Q9H252 994 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 LRRC19Q9H756 370 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 CATSPERBQ9H7T0 1116 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 PLA2G4CQ9UP65 541 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SLC8A2Q9UPR5 921 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 ACTL7AQ9Y615 435 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 RAMP2O60895 175 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SRPRAP08240 638 aaKnown RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 KRT7P08729 469 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 DGKEP52429 567 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 COPAP53621 1224 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SULT2A1Q06520 285 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 FNDC3BQ53EP0 1204 aaKnown RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 LRRC38Q5VT99 294 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 AFMIDQ63HM1 303 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 ARHGAP12Q8IWW6 846 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 TP53INP2Q8IXH6 220 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 CAMKK1Q8N5S9 505 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 KDM1BQ8NB78 822 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 NETO2Q8NC67 525 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 FRS2Q8WU20 508 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 FAF2Q96CS3 445 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MKRN2Q9H000 416 aaKnown RBP14.66□□□□□ -0.06
CBWD3-217ENST00000621474 MAGEH1Q9H213 219 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 HS3ST2Q9Y278 367 aa14.66□□□□□ -0.06
CBWD3-217ENST00000621474 SHROOM3Q8TF72 1996 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 SPAG17Q6Q759 2223 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 DNAH14Q0VDD8 3507 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 TCRBV21S2A2A0A5A6 115 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 GRID2IPA4D2P6 1211 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 TTC34A8MYJ7 566 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms