RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CCDC90BQ9GZT6 254 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 COPG2Q9UBF2 871 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 DNAJB4Q9UDY4 337 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PSMD13Q9UNM6 376 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 KPNA7A9QM74 516 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TMX2-CTNND1H3BSU7 103 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 CYP2C9P11712 490 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TPH1P17752 444 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PRKCHP24723 683 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 GABRB2P47870 512 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 CPT1AP50416 773 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TBCCQ15814 346 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 KLC3Q6P597 504 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PACS1Q6VY07 963 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TDRD5Q8NAT2 981 aaKnown RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 CIB1Q99828 191 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SDCBP2Q9H190 292 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TMPRSS4Q9NRS4 437 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PTTG2Q9NZH5 202 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 MID2Q9UJV3 735 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 AURKCQ9UQB9 309 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SNX9Q9Y5X1 595 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SF3B1O75533 1304 aaKnown RBP eCLIP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ARHGAP10A1A4S6 786 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ARHGEF37A1IGU5 675 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TRDMT1O14717 391 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 GAS2O43903 313 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 STBD1O95210 358 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TNFAIP8O95379 198 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PDGFRBP09619 1106 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 KCNA2P16389 499 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CKMT2P17540 419 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PSMC3P17980 439 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 IL4RP24394 825 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ASPAP45381 313 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NUMBP49757 651 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NAGLUP54802 743 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 MTTPP55157 894 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CLDN10P78369 228 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PTPN11Q06124 597 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NSUN2Q08J23 767 aaKnown RBP eCLIP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 RALGDSQ12967 914 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 DCTN2Q13561 401 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SH3D19Q5HYK7 790 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 KLHL35Q6PF15 583 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 FAM183BPQ6ZVS7 135 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 LPCAT2Q7L5N7 544 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SCN4BQ8IWT1 228 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 KYQ8NBH2 561 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 RNF139Q8WU17 664 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 JADE3Q92613 823 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 KIF12Q96FN5 646 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 FAM210AQ96ND0 272 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 OMDQ99983 421 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TMEM79Q9BSE2 394 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 FSD1LQ9BXM9 530 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ZNF518BQ9C0D4 1074 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ELOVL4Q9GZR5 314 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ING2Q9H160 280 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PORCNQ9H237 461 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SARS2Q9NP81 518 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CPSF3Q9UKF6 684 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ITGA11Q9UKX5 1188 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ABCA3Q99758 1704 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 RRN3P2A6NIE6 340 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 GSTA4O15217 222 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PAPSS1O43252 624 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CYP2F1P24903 491 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PIK3R1P27986 724 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ANKDD1AQ495B1 522 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PITRM1Q5JRX3 1037 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 IL23RQ5VWK5 629 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 EEF1DP3Q658K8 133 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 RGMBQ6NW40 437 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 BNC2Q6ZN30 1099 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ARCQ7LC44 396 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TP53INP2Q8IXH6 220 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NIPA2Q8N8Q9 360 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TMEM174Q8WUU8 243 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 GAB3Q8WWW8 586 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NDRG1Q92597 394 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SLC4A5Q9BY07 1137 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SENP6Q9GZR1 1112 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ABHD16BQ9H3Z7 469 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TMEM233B4DJY2 109 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TK2O00142 265 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 BIRC5O15392 142 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PHGDHO43175 533 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 MGEA5O60502 916 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 GLRA3O75311 464 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CLIC3O95833 236 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 JUNP05412 331 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NFICP08651 508 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 HSPA8P11142 646 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ENTPD1P49961 510 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms