RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 GFRA2O00451 464 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 SCAMP3O14828 347 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RASA4O43374 803 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 TIMM44O43615 452 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 MFSD11O43934 449 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 CNTN5O94779 1100 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 ASLP04424 464 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RENBPP51606 427 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 PLK1P53350 603 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 VCPP55072 806 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 IL10RBQ08334 325 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 PPIDQ08752 370 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 AP1B1Q10567 949 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 GRM2Q14416 872 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RFTN1Q14699 578 aaPredicted RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 SLC45A4Q5BKX6 768 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RNF219Q5W0B1 726 aaPredicted RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 GRAMD4Q6IC98 578 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 AADACL2Q6P093 401 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 FATE1Q969F0 183 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 RSPRY1Q96DX4 576 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 AP1M1Q9BXS5 423 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 MAGEB5Q9BZ81 275 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 DNAJC17Q9NVM6 304 aaKnown RBP11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
SNORD3D-201ENST00000619178 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 GOLGA6CA6NDK9 693 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 GOLGA6BA6NDN3 693 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SGK1O00141 431 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 FANCGO15287 622 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 KDELR3O43731 214 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 LIASO43766 372 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SLU7O95391 586 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 ECEL1O95672 775 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 APODP05090 189 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 GOLGA6DP0CG33 693 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SRFP11831 508 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 PABPC1P11940 636 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 POLR2EP19388 210 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 HSPA9P38646 679 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SERINC3Q13530 473 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 LLGL1Q15334 1064 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 AFMIDQ63HM1 303 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 ZC3H18Q86VM9 953 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 RALGPS2Q86X27 583 aaPredicted RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SLC44A3Q8N4M1 653 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SLC35B2Q8TB61 432 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 ARHGEF2Q92974 986 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 BHMTQ93088 406 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 OLFM3Q96PB7 478 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 PNKPQ96T60 521 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SPON2Q9BUD6 331 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SLC39A8Q9C0K1 460 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 GOLGA6AQ9NYA3 693 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 PLK2Q9NYY3 685 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 IPO11Q9UI26 975 aaKnown RBP11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 ATG2BQ96BY7 2078 aa11.29□□□□□ -0.6
SNORD3D-201ENST00000619178 CKAP5Q14008 2032 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 CBX4O00257 560 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 MAN2B1O00754 1011 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 NPC1O15118 1278 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 MATN3O15232 486 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 IL9P15248 144 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 ARSAP15289 507 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 PECAM1P16284 738 aaPredicted RBP11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 CES1P23141 567 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 COILP38432 576 aaPredicted RBP11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 TNNT3P45378 269 aaPredicted RBP11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 PAPOLAP51003 745 aaKnown RBP11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 DR1Q01658 176 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 GBE1Q04446 702 aa11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
SNORD3D-201ENST00000619178 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms