RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 AVILO75366 819 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 PGM3O95394 542 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM200BP0CF97 657 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 PDGFRAP16234 1089 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CRABP2P29373 138 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 HOXC8P31273 242 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 NDST1P52848 882 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SNX16P57768 344 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ART3Q13508 389 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ANKRD20A4Q4UJ75 823 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 FBXO47Q5MNV8 452 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TCHHL1Q5QJ38 904 aaPredicted RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 LHX8Q68G74 356 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 PDPK2PQ6A1A2 396 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 MYLK4Q86YV6 388 aaPredicted RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 RNF168Q8IYW5 571 aaPredicted RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 GSDMBQ8TAX9 411 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 OCEL1Q9H607 264 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CYP3A43Q9HB55 503 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SAGE1Q9NXZ1 904 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KANSL3Q9P2N6 904 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SIGLEC16A6NMB1 481 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 BIRC5O15392 142 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 PQBP1O60828 265 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 HUS1O60921 280 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 VCLP18206 1134 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 GRK2P25098 689 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CNTFP26441 200 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 MIPP30301 263 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC1A6P48664 564 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KYAT3Q6YP21 454 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 DENND5BQ6ZUT9 1274 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 RAPH1Q70E73 1250 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TREML1Q86YW5 311 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SMG8Q8ND04 991 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM172AQ8WUF8 416 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TMEM176AQ96HP8 235 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF560Q96MR9 790 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 GCNAQ96QF7 691 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 NT5C1AQ9BXI3 368 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CHST12Q9NRB3 414 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 RHBDL2Q9NX52 303 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 DERAQ9Y315 318 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CYB561D2O14569 222 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 LRCH4O75427 683 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 POMCP01189 267 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 THP07101 528 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 BPGMP07738 259 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 RPL5P46777 297 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 GCGRP47871 477 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TAF6P49848 677 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 PTPN11Q06124 597 aaPredicted RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 DBN1Q16643 649 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC5A9Q2M3M2 681 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 C9orf57Q5W0N0 161 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KRT80Q6KB66 452 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KLC3Q6P597 504 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 C4orf22Q6V702 233 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ACOT1Q86TX2 421 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KBTBD2Q8IY47 623 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 UBA3Q8TBC4 463 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TFAP2BQ92481 460 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 LRRC39Q96DD0 335 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ARHGAP9Q9BRR9 750 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 TSEN34Q9BSV6 310 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 HAUS8Q9BT25 410 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 DNAI2Q9GZS0 605 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 SDCBP2Q9H190 292 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 STN1Q9H668 368 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KCNK13Q9HB14 408 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF180Q9UJW8 692 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 BARX2Q9UMQ3 279 aaPredicted RBP7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 CDY1Q9Y6F8 540 aa7.14□□□□□ -1.27
SRGAP3-213ENST00000618999 KPNA7A9QM74 516 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 E7ESA3 106 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ARVCFO00192 962 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 AIM2O14862 343 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SERPINE1P05121 402 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 GPD1P21695 349 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ETFBP38117 255 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 SCNN1GP51170 649 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ITGA9Q13797 1035 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 LPIN1Q14693 890 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 N4BP2L1Q5TBK1 243 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 HEATR6Q6AI08 1181 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 C16orf89Q6UX73 402 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 NPNTQ6UXI9 565 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 B3GNT6Q6ZMB0 384 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 GPR152Q8TDT2 470 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 GFM2Q969S9 779 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 DGCR14Q96DF8 476 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CNBD2Q96M20 576 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM49BQ9NUQ9 324 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
SRGAP3-213ENST00000618999 CACNG4Q9UBN1 327 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms