RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DSELQ8IZU8 1212 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 DNAAF3Q8N9W5 541 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 PIP4K2CQ8TBX8 421 aa20.81■□□□□ 0.92
NEK3-208ENST00000618534 SREK1Q8WXA9 508 aaKnown RBP20.81■□□□□ 0.92
NEK3-208ENST00000618534 ILKAPQ9H0C8 392 aaPredicted RBP20.81■□□□□ 0.92
NEK3-208ENST00000618534 PRPF19Q9UMS4 504 aaKnown RBP20.81■□□□□ 0.92
NEK3-208ENST00000618534 MATN2O00339 956 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 AMHP03971 560 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PTPN3P26045 913 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 EPHA3P29320 983 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 TKTP29401 623 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 MRPS22P82650 360 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 PAFAH1B3Q15102 231 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 ZBTB6Q15916 424 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 C9orf57Q5W0N0 161 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 SPATA24Q86W54 205 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PSTKQ8IV42 348 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 EIF2AQ9BY44 585 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 OXSMQ9NWU1 459 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 BFARQ9NZS9 450 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 DERAQ9Y315 318 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PPP2R3BQ9Y5P8 575 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 POLR2AP24928 1970 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 TK2O00142 265 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 IRF6O14896 467 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 AP2A1O95782 977 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 XRCC1P18887 633 aaPredicted RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 PMLP29590 882 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 MSX2P35548 267 aaPredicted RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 GNL1P36915 607 aaPredicted RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 DPYSQ14117 519 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 LSM12Q3MHD2 195 aaKnown RBP20.8■□□□□ 0.92
NEK3-208ENST00000618534 C16orf89Q6UX73 402 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 CRYBG2Q8N1P7 616 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 MARVELD2Q8N4S9 558 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 KYQ8NBH2 561 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 BEST2Q8NFU1 509 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 ADAM32Q8TC27 787 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 HSFY1Q96LI6 401 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 CDRT15Q96T59 188 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 EPAS1Q99814 870 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PLEKHA5Q9HAU0 1116 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 UBAP1Q9NZ09 502 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 CLIC5Q9NZA1 410 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PCDHGB4Q9UN71 923 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 PCDHGB5Q9Y5G0 923 aa20.8■□□□□ 0.92
NEK3-208ENST00000618534 SMIM31A0A1B0GVY4 71 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 RGSL1A5PLK6 1076 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 EEF2KO00418 725 aaKnown RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 ATP9BO43861 1147 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 PGGT1BP53609 377 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 NME3Q13232 169 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 MPP3Q13368 585 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 DCAF4L1Q3SXM0 396 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 CERCAMQ5T4B2 595 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 BNC2Q6ZN30 1099 aaPredicted RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 CNDP1Q96KN2 507 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 SERPINI1Q99574 410 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 PRDM16Q9HAZ2 1276 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 RBPJLQ9UBG7 517 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 GINS2Q9Y248 185 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 RALGAPA2Q2PPJ7 1873 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 DCLK1O15075 740 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 DENRO43583 198 aaKnown RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 DNAJA2O60884 412 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 H2AFYO75367 372 aaKnown RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 DAB1O75553 588 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 PKNOX1P55347 436 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 FLOT2Q14254 428 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 PIGZQ86VD9 579 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 KCNMB4Q86W47 210 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 RCN3Q96D15 328 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 NMD3Q96D46 503 aaKnown RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 OTUD5Q96G74 571 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 VPS39Q96JC1 886 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 APOL2Q9BQE5 337 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 ACE2Q9BYF1 805 aaPredicted RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 UBE2OQ9C0C9 1292 aaKnown RBP20.79■□□□□ 0.92
NEK3-208ENST00000618534 RAP2CQ9Y3L5 183 aa20.79■□□□□ 0.92
NEK3-208ENST00000618534 FAM72CH0Y354 149 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 GOLGA8TH3BQL2 631 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 M0QYT0 321 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SPTLC1O15269 473 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 HDAC3O15379 428 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 CNGA3Q16281 694 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 ZNF423Q2M1K9 1284 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SLC5A9Q2M3M2 681 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 FAM72AQ5TYM5 149 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SEL1L3Q68CR1 1132 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 FAM72DQ6L9T8 149 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 FAM72BQ86X60 149 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 SLC7A14Q8TBB6 771 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 NUF2Q9BZD4 464 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 OCEL1Q9H607 264 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 CASS4Q9NQ75 786 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 IARS2Q9NSE4 1012 aaKnown RBP20.78■□□□□ 0.92
NEK3-208ENST00000618534 C20orf96Q9NUD7 363 aaPredicted RBP20.78■□□□□ 0.92
NEK3-208ENST00000618534 CSADQ9Y600 493 aa20.78■□□□□ 0.92
NEK3-208ENST00000618534 HOXA11P31270 313 aaPredicted RBP20.78■□□□□ 0.92
NEK3-208ENST00000618534 GRIA4P48058 902 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms