RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PIH1D1Q9NWS0 290 aaKnown RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 NENFQ9UMX5 172 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TRAF6Q9Y4K3 522 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TCF4P15884 667 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 IDH3AP50213 366 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 VAC14Q08AM6 782 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 PITRM1Q5JRX3 1037 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 ZFP1Q6P2D0 407 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 OTOP3Q7RTS5 596 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 RPRD1BQ9NQG5 326 aaKnown RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 PFDN2Q9UHV9 154 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 KMOO15229 486 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 LIASO43766 372 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 SCO1O75880 301 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 CYP11B1P15538 503 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 CHRNA5P30532 468 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 GRIA3P42263 894 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 GNG2P59768 71 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 FMO1Q01740 532 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 PIGFQ07326 219 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 OTUD3Q5T2D3 398 aaPredicted RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TMEM198Q66K66 360 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 DPY19L2P1Q6NXN4 242 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TMEM246Q9BRR3 403 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 FOXP3Q9BZS1 431 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
MATR3-227ENST00000618441 NID2Q14112 1375 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TBX1O43435 398 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 EPN2O95208 641 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 MT-CO1P00395 513 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 ABCB1P08183 1280 aaPredicted RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 ETV4P43268 484 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 TCP10Q12799 353 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 CHERPQ8IWX8 916 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 SYTL1Q8IYJ3 562 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 GOT1L1Q8NHS2 421 aaPredicted RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 GLT1D1Q96MS3 346 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PCSK1NQ9UHG2 260 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 TSPAN4O14817 238 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PLSCR1O15162 318 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 GDF10P55107 478 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 DAB2P98082 770 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 IFITM2Q01629 132 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 CEACAM7Q14002 265 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PGM2L1Q6PCE3 622 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 VGLL2Q8N8G2 317 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PTCD2Q8WV60 388 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 HAS1Q92839 578 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 REXO4Q9GZR2 422 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 A0A1W2PRQ8 180 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 CXorf49A8MYA2 514 aaPredicted RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 E7ENX8 843 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 F5H6K3 240 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 K7ENM7 598 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 M0R2N6 131 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 TGFB1I1O43294 461 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 HTRA2O43464 458 aaPredicted RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 TRIM16O95361 564 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 KLRC2P26717 231 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 ATP5OP48047 213 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 KRT6CP48668 564 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 MFAP3P55082 362 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 SNAP25P60880 206 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 LSM12Q3MHD2 195 aaKnown RBP12.49□□□□□ -0.41
MATR3-227ENST00000618441 UGT3A1Q6NUS8 523 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 CYP2U1Q7Z449 544 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PLA2G12BQ9BX93 195 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 IMPG2Q9BZV3 1241 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
MATR3-227ENST00000618441 ZBTB14O43829 449 aa12.48□□□□□ -0.41
MATR3-227ENST00000618441 NBNO60934 754 aa12.48□□□□□ -0.41
MATR3-227ENST00000618441 TSC22D2O75157 780 aa12.48□□□□□ -0.41
MATR3-227ENST00000618441 XYLBO75191 536 aa12.48□□□□□ -0.41
MATR3-227ENST00000618441 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
MATR3-227ENST00000618441 BPGMP07738 259 aa12.48□□□□□ -0.41
MATR3-227ENST00000618441 MATN1P21941 496 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms