RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ETS2P15036 469 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 CYP11B1P15538 503 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 NR1D1P20393 614 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 RAC1P63000 192 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 YWHAHQ04917 246 aaPredicted RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 KLHL38Q2WGJ6 581 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 OVOS1Q6IE37 1185 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 CYP4V2Q6ZWL3 525 aaPredicted RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 PATL1Q86TB9 770 aaKnown RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 TDRD15B5MCY1 1934 aaKnown RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 A0A087X0T9 212 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 C5orf60A6NFR6 353 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 TMEM114B3SHH9 223 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 GMNNO75496 209 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 PFKMP08237 780 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 FAM228BP0C875 321 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 POU2F1P14859 743 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 LRPAP1P30533 357 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 MLLT3P42568 568 aaPredicted RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 RAD23BP54727 409 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 JAM2P57087 298 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 DAB2P98082 770 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SLC2A14Q8TDB8 520 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 JPH3Q8WXH2 748 aaPredicted RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 RAD9AQ99638 391 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SDHAF3Q9NRP4 125 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 ABI2Q9NYB9 513 aaPredicted RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 DERAQ9Y315 318 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 FGF18O76093 207 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 VAV1P15498 845 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 PSMA4P25789 261 aaKnown RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 IRS1P35568 1242 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SLC39A12Q504Y0 691 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
SRRT-216ENST00000618262 HGSNATQ68CP4 663 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 TMC7Q7Z402 723 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 ATL1Q8WXF7 558 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 SHC3Q92529 594 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 ZNF558Q96NG5 402 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
SRRT-216ENST00000618262 CTAGE9A4FU28 777 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 HSF2BPO75031 334 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 BEST1O76090 585 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 P4HA1P13674 534 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 CPB1P15086 417 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 CPA3P15088 417 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 TNFAIP3P21580 790 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 ATP5OP48047 213 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 GPR15P49685 360 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.43
SRRT-216ENST00000618262 Q3ZCU0 254 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 LIN52Q52LA3 116 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 BTBD6Q96KE9 485 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 PCDHB18PQ96TA0 734 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 GDF15Q99988 308 aa12.33□□□□□ -0.43
SRRT-216ENST00000618262 IQANK1A0A1B0GTG1 560 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ADAM23O75077 832 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 CILPO75339 1184 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ERVFC1P60507 584 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 GCNT1Q02742 428 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 SF3B4Q15427 424 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■■■■■ 28.2
SRRT-216ENST00000618262 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ALKBH8Q96BT7 664 aaKnown RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 KRIT1O00522 736 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 IDH3BO43837 385 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 GRAP2O75791 330 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms